DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and CG6178

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_651221.1 Gene:CG6178 / 42867 FlyBaseID:FBgn0039156 Length:544 Species:Drosophila melanogaster


Alignment Length:524 Identity:171/524 - (32%)
Similarity:283/524 - (54%) Gaps:22/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LHEYVWRDFKKWERRTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEY 141
            |.:|:...:|.:..||..|..:...:|:.:.|..:....|..|| |..:::.||:.:...|...:
  Fly    27 LGQYILDKYKSFGDRTVLVDAVNGVEYSASFMHKSIVRLAYILQ-KLGVKQNDVVGLSSENSVNF 90

  Fly   142 PIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVG---TVSGFATLSQASKLVGRQIPIA 203
            .:|....:..|.||..:|..|:..|:...:..|..|.:..   |:...|.::..:|.|.     .
  Fly    91 ALAMFAGLAVGATVAPLNVTYSDREVDHAINLSKPKIIFASKITIDRVAKVASKNKFVK-----G 150

  Fly   204 VVRTSAEEALPEGAIDFSELTSTQNVRYE-DLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNN 267
            ::..|......:...|..||...:..:.: |..:|.....:|:..:..|||||||||||.|:..|
  Fly   151 IIALSGTSKKFKNIYDLKELMEDEKFKTQPDFTSPAANKDEDVSLIVCSSGTTGLPKGVQLTQMN 215

  Fly   268 ITSNCE-QVQAS-LPLDLMGPQNTLPGVLPFFHIYG-LTVVMLSKLGQGCRLATMPCFKPDDFMR 329
            :.:..: |:|.: :|::    :.||..|:|:||.:| ||::..:.:  |.||..:|.|:...|:.
  Fly   216 LLATLDSQIQPTVIPME----EVTLLTVIPWFHAFGCLTLITTACV--GARLVYLPKFEEKLFLS 274

  Fly   330 SLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGY 394
            :::||:..:..:|||:.:|:..||.:.:.....|.|::.||||:.:...::...:......:|||
  Fly   275 AIEKYRVMMAFMVPPLMVFLAKHPIVDKYDLSSLMVLLCGAAPLSRETEDQIKERIGVPFIRQGY 339

  Fly   395 GMTEASPVVLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGYLN 459
            |::|::..||:..:......|.|||.....||::  |....|.:|....||||.:|..:|.||:.
  Fly   340 GLSESTLSVLVQNDEFCKPGSVGVLKVGIYAKVI--DPDTGKLLGANERGELCFKGDGIMKGYIG 402

  Fly   460 NDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAA 524
            :.::.|.....| ||.:||:.:||:|..|:|.||:|||||.||:||||||:||:|..:.||.:||
  Fly   403 DTKSTQTAIKDG-WLHTGDIGYYDDDFEFFIVDRIKELIKYKGYQVPPAEIEALLLTNDKIKDAA 466

  Fly   525 VFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYKKLEGGVIFVDEVPKNPTGKILRR 589
            |.|.|.|..||.|.|.||.:...:.:..|:..:|.:..:..|:|.||||||||:||||:||||||
  Fly   467 VIGKPDEEAGELPLAFVVKQANVQLTENEVIQFVNDNASPAKRLRGGVIFVDEIPKNPSGKILRR 531

  Fly   590 ELKE 593
            .|:|
  Fly   532 ILRE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 171/524 (33%)
Firefly_Luc_like 99..587 CDD:213279 159/494 (32%)
CG6178NP_651221.1 PLN02246 26..537 CDD:215137 171/524 (33%)
Firefly_Luc_like 43..529 CDD:213279 160/500 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I1304
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I1153
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 1 1.000 - - otm51455
orthoMCL 1 0.900 - - OOG6_100107
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
109.870

Return to query results.
Submit another query.