DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and CG3961

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:455 Identity:106/455 - (23%)
Similarity:181/455 - (39%) Gaps:74/455 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 VLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFAT--LSQA 192
            ::.|...|.||:.:...|.....|.|..:.....||..|..:..:..:.::....|.|.  |.:|
  Fly   160 LIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIVEDDGKAAMLLEKA 224

  Fly   193 SKLVGRQIPIAVVR-TSAEEALPEGA-----IDFSELTSTQNVRYEDLKAPK-EASADDMVFLPF 250
            .:.:...:.|..:| |:.|.|...|.     ||..:|.:..|       .|: ..:|:|:..:.:
  Fly   225 PRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGN-------HPEVPPTAEDLCTVCY 282

  Fly   251 SSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGVLPFFHIY------GLTVVMLSK 309
            :|||||.||||||:|.|:.:....|...:....:...:.:...||..|::      |:..|    
  Fly   283 TSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGDVMVSFLPLAHMFERCCENGMYYV---- 343

  Fly   310 LGQGC------------------RLATMPCFKPDDFMRSLDKYQGSI---------LNLV----- 342
              .||                  :...||.. |....|..||.|..|         .|:.     
  Fly   344 --GGCVGFYSGDIKELTNDLKMLKPTVMPAV-PRLLNRVYDKIQNDISASGLKRGLFNMAMRAKE 405

  Fly   343 PPIALFMINH---------PKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTE 398
            ..||..::..         .|:.|....:|::::.|:||:. .:|..|:......:..:|||.||
  Fly   406 KEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLA-GNVLTFMRCALGCLVLEGYGQTE 469

  Fly   399 ASPVVLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEA 463
            .:..:.||.:|:.|....|...:....|:|  |..:.:....:.|||:||||..|..||..:.|.
  Fly   470 CTGAITLTVQGDHVPNHVGPPVSCNAVKLV--DVPEMEYFANQNTGEVCVRGSNVFHGYYKDPEK 532

  Fly   464 NQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKV-KGFQVPPAELEAVLRDHPKILEAAVFG 527
            .........|..:|||..:..:|...|.||.|.:.|: :|..:.|.::|.:......:.:..|:|
  Fly   533 TAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYG 597

  Fly   528  527
              Fly   598  597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 106/455 (23%)
Firefly_Luc_like 99..587 CDD:213279 106/455 (23%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 106/455 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452136
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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