DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and CG18586

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster


Alignment Length:543 Identity:123/543 - (22%)
Similarity:225/543 - (41%) Gaps:59/543 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PNVPLHEYVWRDFKKWERRTAAV-----CVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLA 132
            ||:.:.|.::.|.....:..|.:     .|:|........||.||      ......|.:.|::.
  Fly    35 PNLSIGEIIFGDMVNNPKLIAQISITEDIVLTREDLHMNAMRVAS------YMRNMGLGQTDIVG 93

  Fly   133 ICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVG 197
            :...:..............|..:..::..|....||:....:..:.:......:..:..|:|  .
  Fly    94 VMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFGITKPRLIFCDGDEYEKVKSATK--D 156

  Fly   198 RQIPIAVVRTSAEEALPEGAIDFSELTST------QNVRYEDLKAPKEASADDMVFLPFSSGTTG 256
            .|:.|..:|..     |.|::...::.:|      |.:|.:|       ..|..:.:..||||:|
  Fly   157 LQVTIVTMRNH-----PRGSVRIQDVLTTPVMQNFQPLRLKD-------GIDHTLAILSSSGTSG 209

  Fly   257 LPKGVMLSHNN------ITSNCEQVQ-ASLPLDLMGPQNTLPGVLPFFHIYGLTVVMLSKLGQGC 314
            .||.|.:|:::      :..|...:| .|..||...               ||::.:.|.:....
  Fly   210 FPKAVTISNSHKIIVDYMAINNSNIQYTSSTLDWCS---------------GLSMAITSGVFSTT 259

  Fly   315 RLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVE 379
            .:.....|.|..|.|::.||:.|::.|.........|.|:........|..|:.|.:........
  Fly   260 SIIADCDFDPGLFCRAIGKYRISMVLLSSSYLAIFANCPEFESADLSSLNYVIFGGSSCSLEVQR 324

  Fly   380 RFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTG 444
            :..::..:......||:||.:....:....::...|.|......:.|::...|...:   |...|
  Fly   325 KVRSRLSHDCLNFCYGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKVIDEQGEAQE---PNVVG 386

  Fly   445 ELCVRGPQVMAGYLNN-DEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPA 508
            |:|....|..|||..| ||..|:. ...||:.:||:.:.|:||..::.||:|:::|.:.....|:
  Fly   387 EICFHNSQKWAGYYKNPDETRQIQ-DSENWIHTGDLGYVDKDGYLFVIDRLKDMLKYQNIMYYPS 450

  Fly   509 ELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERV-AHYKKLEGGV 572
            |:|.|:.:.|.:|||.||||....||:...|.:|.:.|.:..|:::..||.:|: |.:|:|.||.
  Fly   451 EIENVIAEMPNVLEACVFGIWDPVNGDEAAASLVKKPGTQLEAQDVVEYVRKRITAKFKQLNGGA 515

  Fly   573 IFVDEVPKNPTGKILRRELKEKF 595
            :.||::.::...|..|..:||.|
  Fly   516 LIVDQIVRSGNRKTNRSAVKEHF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 120/537 (22%)
Firefly_Luc_like 99..587 CDD:213279 113/502 (23%)
CG18586NP_647993.2 CaiC 35..541 CDD:223395 123/543 (23%)
AFD_class_I 55..530 CDD:302604 115/513 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452142
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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