DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and Acsm5

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001014184.3 Gene:Acsm5 / 361637 RGDID:1309578 Length:578 Species:Rattus norvegicus


Alignment Length:613 Identity:138/613 - (22%)
Similarity:226/613 - (36%) Gaps:144/613 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 TSPFDPVTIPNV------------PLHEY---------VWRDFKK-----------WERRTAAVC 96
            |.| .|..||.|            |:.||         ||...:|           |...:.   
  Rat    24 TQP-PPPPIPEVVATWEAISLGKRPVPEYFNFAHDVLDVWSQLEKTGHRPPNPAFWWVNGSG--- 84

  Fly    97 VITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPV 161
              |:.::||.::...|...|..|:....|:..|.|.:.||.|||:.:..:..:..|:.:......
  Rat    85 --TEVKWTFEELGKQSRKAANILEGACGLKPGDRLMLVLPRLPEWWLTIVACMRTGVVMIPGISQ 147

  Fly   162 YTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAIDFSELTST 226
            .|..::..:|..:..|.:: |....|....|   :....|....|....:....|.|:|.||...
  Rat   148 LTQKDLKYRLQAARVKSII-TSDALAPHVDA---ISADCPSLQSRLLVSDTSRPGWINFRELLRV 208

  Fly   227 QNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHN------NITSNCEQVQASLPLDLMG 285
            .:..:..|:.   .|.|.|. :.|:|||||.||  |:.|:      ...::..::.|....|:. 
  Rat   209 ASPEHNCLRT---RSGDSMA-IYFTSGTTGTPK--MVEHSQCSYGLGFVASGRRLMALTESDIF- 266

  Fly   286 PQNTLP----------------GVLPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKY 334
             .||..                |...|.|                   .:|.......:.:|.::
  Rat   267 -WNTTDTGWVKAAWTLFSAWANGACVFVH-------------------ELPQVDAQTILNTLCRF 311

  Fly   335 QGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPI--------------------GQHDVE 379
            ..:.:..||.:...::.. .||:.....|:..::|...:                    ||.:..
  Rat   312 PITTICCVPTLFRLLVQE-DLTRYKFQCLRHCLAGGEALNSDVRDKWKNQTGLEIHEGYGQSETV 375

  Fly   380 RFLNKFPNTVFKQGYGMTEASP---VVLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPR 441
            .....|..:..|.| .|.:|||   |.::..|||       |||...|..|         .:..:
  Rat   376 LICGNFRGSTIKSG-SMGKASPPYDVQIVDEEGN-------VLPPGKEGNI---------AIRIK 423

  Fly   442 TTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVP 506
            .|...|     :...||:|.|....: ..|::..:||.|..||||.|:...|..::|....:::.
  Rat   424 PTRPFC-----LFNCYLDNPEKTAAS-EQGDFYITGDRAHMDEDGYFWFVGRNDDVINSSSYRIG 482

  Fly   507 PAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVL-----RQGEKASAEEISAYVAERVAHYK 566
            |.|:|:.|.:||.:||:||...|....||..:|.:||     ....:|...|:..:|....|.| 
  Rat   483 PVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLSPAYVSHDPEALTRELQEHVKTVTAPY- 546

  Fly   567 KLEGGVIFVDEVPKNPTGKILRRELKEK 594
            |....|.|:.|:||..:|||||.:|:.:
  Rat   547 KYPRKVAFISELPKTVSGKILRSKLRNQ 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 131/588 (22%)
Firefly_Luc_like 99..587 CDD:213279 121/537 (23%)
Acsm5NP_001014184.3 AFD_class_I 48..576 CDD:418409 131/588 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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