DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and acsl4b

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001093209.1 Gene:acsl4b / 334561 ZFINID:ZDB-GENE-030131-6493 Length:671 Species:Danio rerio


Alignment Length:599 Identity:142/599 - (23%)
Similarity:216/599 - (36%) Gaps:174/599 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 QKP-DVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATL 189
            ||| ..:||......|:.||..........:.|:......|.:|..|...||..|:.:..    |
Zfish   107 QKPRQTIAIFCETRAEWMIAAQACFRRNYPLVTLYATLGEDAVAYGLNQCGATHLITSTE----L 167

  Fly   190 SQASKL-------VGRQIPIAVVRTSAEEA-LPEGAIDFSELTSTQ--------NVRYEDLKAPK 238
            .| |||       .|.|..|.|......:| .|:..|..|....|:        :|.||      
Zfish   168 LQ-SKLKNVLFAVSGLQHVIYVGSGEVHQADYPQSLIIHSMQEVTELGAKPENLSVEYE------ 225

  Fly   239 EASADDMVFLPFSSGTTGLPKGVMLSHNNI----TSNCEQVQASLPLDLMGPQNTLPGVLPFFHI 299
            ..||.|:..:.::||:||.||||.:.|:|:    ...|:::..      :|.|:|:...||..|:
Zfish   226 RPSASDLAVVMYTSGSTGNPKGVKMQHSNLIAGMAGQCQRIPG------LGSQDTIVSYLPLAHV 284

  Fly   300 YGLTVVMLSKLGQGCRLA-TMPCFKPDDFMRSLDKYQG-------SILNLVPPI----------- 345
            ..|| ..:|.|..||||. :.|....|...:.....:|       :::..||.|           
Zfish   285 LELT-AEISCLSHGCRLGYSSPHTLTDQSSKIKKGSKGDCSVLKPTLIAAVPEIMDRICKNVNGK 348

  Fly   346 ---------ALFMINHPKLTQETAPH---------------------LKVVMSGAAPIGQHDVER 380
                     .||.:......|:.:..                     ::.::||.||:.. ..:|
Zfish   349 LQEMSVIKRTLFKLGFDYKLQQVSKGADSPMCDMLFFKQVNVLLGGCVRRMLSGGAPLSA-STQR 412

  Fly   381 FLNK--FPNTVFKQGYGMTEASPVVLLTPEGNKVYASTGVLPASTEAKIVPL----DGSDAKGVG 439
            |:|.  .|..|   |||:||......::...:   .|||.:.|......:.|    :|.......
Zfish   413 FMNVCFCPIAV---GYGLTETCGAGTISDSSD---YSTGRVGAPLICSEIKLRDWPEGGYTSQDK 471

  Fly   440 PRTTGELCVRGPQVMAGYLNN-----------DEANQVTFYPGNWLRSGDVAFYDEDGLFYITDR 493
            |...||:.:.||.|..||..:           |||.|      .|..:||:.....||...|.||
Zfish   472 PHPRGEILIGGPNVAMGYYGSEGEGQNDNFWVDEAGQ------RWFSTGDIGEVHPDGCLEIVDR 530

  Fly   494 MKELIKVK-GFQVPPAELEAVLRDHPKILEAAV-----------FGIPHEFNGEAPRAIVVLRQG 546
            .|:|:|:: |..|...::||.:::.|.|....|           |.:|::.|         |.:.
Zfish   531 KKDLVKLQAGEYVSLGKVEAAMKNSPLIDNICVYASSDQNYVISFVVPNQKN---------LTEL 586

  Fly   547 EKASA--------------EEISAYVAERVAHYKKLEGGVIFVDEVPKN----------PTG--- 584
            .|.|.              ||....|.:.:|...|||.     .|||:.          .||   
Zfish   587 AKKSGIDGEWDDICNHTMMEEEVLKVIKEIAVTSKLER-----FEVPQKIRLSSEPWTPETGLVT 646

  Fly   585 ---KILRRELKEKF 595
               |:.|:|||..:
Zfish   647 DAFKLKRKELKNHY 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 142/597 (24%)
Firefly_Luc_like 99..587 CDD:213279 138/589 (23%)
acsl4bNP_001093209.1 PLN02387 26..668 CDD:215217 142/599 (24%)
LC-FACS_euk 81..668 CDD:213293 142/599 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582920
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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