DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and Acsbg2

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001034203.1 Gene:Acsbg2 / 328845 MGIID:3587728 Length:667 Species:Mus musculus


Alignment Length:639 Identity:148/639 - (23%)
Similarity:246/639 - (38%) Gaps:138/639 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QRTTSTASAQRERTQSVSETDKFLHYSPEDGYYKTSPFDPVTIPNVPLHEYVWR----------D 84
            :|.|...||......:..:.:..|..|.....::|    |:|||.: ..|...|          :
Mouse    11 ERGTDATSAVPRLWSTHCDGEVLLRLSKHGPGHET----PMTIPEL-FQESAERFSAYPALASKN 70

  Fly    85 FKKWERRTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAI 149
            .|||:       .:|..|| :...|.|:.:.     .|..||:...:.|...|..|:.:..||.|
Mouse    71 GKKWD-------TLTFSQY-YEMCRKAAKSL-----IKLGLQRFQCVGILGFNSVEWVVTALGTI 122

  Fly   150 EAG---LTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIP---IAVVRTS 208
            .||   :.:...|.......:.:|...|   .|:     .....|..|::  .||   :..|:..
Mouse   123 LAGGLCVGIYATNSAEACQYVIQQANVS---ILI-----VENDQQLQKIL--LIPPDKMETVKAI 177

  Fly   209 AEEALP--EGAI------DFSEL-TSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLS 264
            .:..||  |...      ||.|| ....|::.:.:...::|:...::.  ::|||||.||||:||
Mouse   178 VQYKLPLMESMANLYSWNDFMELGNDIPNIQLDRVILSQKANQCAVIL--YTSGTTGTPKGVLLS 240

  Fly   265 HNNITSNCEQVQASLPLD-LMGPQNTLPGVLPFFHIYG-LTVVMLS-KLG-----------QGCR 315
            |:|||.....:...:.:: :.|.|||:...||..||.. ||.:.:. |:|           :|..
Mouse   241 HDNITWTAGAMSQEMEINRVSGKQNTIVSYLPLSHIAAQLTDIWIPIKIGALTFFAQPDALRGTL 305

  Fly   316 LATMPCFKPDDFM---RSLDKYQGSILNLV--------------PPIALFMINHPKLTQETAP-- 361
            :.|:...||..||   |..:|.|.:|...|              ..:.|.:.....|.:...|  
Mouse   306 VYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAFAWAKMLGLKVNTKRMLGKRDIPMN 370

  Fly   362 -------------------HLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTP 407
                               :.....|.|:|:.|...|.||:.  :....:.|||:|.|       
Mouse   371 YRMAKALVFAKVRTSLGLDNCHAFFSSASPLSQDVSEFFLSL--DIPIGEIYGMSECS------- 426

  Fly   408 EGNKVYASTGVLPASTEAKIVP-----LDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVT 467
             |....::..|....:..|::.     |...:.:||     ||:|:.|..|..||||.:||....
Mouse   427 -GPHTVSNKSVYRVLSCGKVLSGCKNMLYNQNKEGV-----GEVCMWGRHVFMGYLNKEEATLEA 485

  Fly   468 FYPGNWLRSGDVAFYDEDGLFYITDRMKE-LIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHE 531
            .....||.|||:...|.....|||.|:|| ||...|..|.|..:|.::::...|:..|:      
Mouse   486 LDENGWLHSGDIGRLDSHDFLYITGRIKEILITAGGENVSPIPIETLVKEKIPIISHAM------ 544

  Fly   532 FNGEAPRAIVVLR----QGEKASAEEISAYVAERVAHYKKLEGGVIFVDEVPKN 581
            ..|:..:.:.:|.    :.::.|.|.::....|..:..:.|......|.::.|:
Mouse   545 LVGDKAKFLCMLLTLKCETDRKSGEPLNKLSVEAKSFCQMLGSQATTVSDILKS 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 137/592 (23%)
Firefly_Luc_like 99..587 CDD:213279 132/560 (24%)
Acsbg2NP_001034203.1 ACSBG_like 69..665 CDD:341256 135/576 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839041
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.