DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and Slc27a4

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001094176.1 Gene:Slc27a4 / 311839 RGDID:1307383 Length:643 Species:Rattus norvegicus


Alignment Length:571 Identity:133/571 - (23%)
Similarity:218/571 - (38%) Gaps:117/571 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 RTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTV 155
            :||.:...|:..:||.|:.|.|::.|..||.: .|...:|:|:.:.|..|:....||..:.|:..
  Rat    90 KTALIFEGTNTHWTFRQLDDYSSSVANFLQAR-GLVSGNVVALFMENRNEFVGLWLGMAKLGVEA 153

  Fly   156 TTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSA--EEALP---E 215
            ..:|.....|.:...|..|.|:.|:               .|.::..||....|  :..|.   .
  Rat   154 ALINTNLRRDALRHCLDTSKARALI---------------FGSEMASAVYEIQAILDPTLTLFCS 203

  Fly   216 GAIDFSEL-TSTQNV--RYEDLKAPK------EASADDMVFLPFSSGTTGLPKGVMLSHNNITSN 271
            |:.:.|.: .:|:::  ..||  |||      :....|.:|..::||||||||..::.|:.....
  Rat   204 GSWEPSTVPANTEHLDPLLED--APKHLPSIPDKGFTDKLFYIYTSGTTGLPKAAIVVHSRYYRM 266

  Fly   272 CEQVQASLPLDLMGPQNTLPGVLPFFH------------IYGLTVVMLSKLGQGCRLATMPCFKP 324
            ...|....   .|.|.:.:...||.:|            ::|:|||:..|            |..
  Rat   267 AALVYYGF---RMRPDDIVYDCLPLYHSAGNIVGIGQCVLHGMTVVIRKK------------FSA 316

  Fly   325 DDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTV 389
            ..|.....||..:|:..:..:..:::|.|  .:|.....||.|:....:.|.....|.::|....
  Rat   317 SRFWDDCIKYNCTIVQYIGELCRYLLNQP--PREAESRHKVRMALGNGLRQSIWTDFSSRFHIPQ 379

  Fly   390 FKQGYGMTEAS------------------------PVVLLTPEGNKVYASTGVLPASTEAKIVPL 430
            ..:.||.||.:                        |:.|:     :|...|..|....:...:|.
  Rat   380 VAEFYGATECNCSLGNFDSQVGACGFNSRILSFVYPIRLV-----RVNEDTMELIRGPDGVCIPC 439

  Fly   431 DGSDAKGVGPRTTGELCVRGP-QVMAGYLNNDEANQV----TFYPGN--WLRSGDVAFYDEDGLF 488
            .    .|...:..|.:..:.| :...||||....|:.    .|..|:  :| :|||...||.|..
  Rat   440 Q----PGQPGQLVGRIIQQDPLRRFDGYLNQGANNKKIASDVFKKGDQAYL-TGDVLVMDELGYL 499

  Fly   489 YITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEE 553
            |..||..:..:.||..|...|:|..|....::.:.||:|:  |..|...||      |..|.|..
  Rat   500 YFRDRTGDTFRWKGENVSTTEVEGTLSRLLQMADVAVYGV--EVPGAEGRA------GMAAVASP 556

  Fly   554 ISAYVAERVAHYKKLEGGVI-------FVDEVPKNPTGKILRRELKEKFSD 597
            .|....|..|...|.|..:.       |:.|:.|..|.|..:.||:::..|
  Rat   557 TSNCDLESFAQTLKKELPLYARPIFLRFLPELHKTGTFKFQKTELRKEGFD 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 132/567 (23%)
Firefly_Luc_like 99..587 CDD:213279 128/551 (23%)
Slc27a4NP_001094176.1 PRK08279 75..643 CDD:236217 133/571 (23%)
hsFATP4_like 99..608 CDD:213305 130/562 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342852
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.