DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and Dip2c

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_038951677.1 Gene:Dip2c / 307067 RGDID:1560155 Length:1626 Species:Rattus norvegicus


Alignment Length:614 Identity:130/614 - (21%)
Similarity:216/614 - (35%) Gaps:186/614 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 TFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIA 168
            |..|:...:...||.|..:.:||..|.:|:..|...:...|..|.:.||....||.|.: |..||
  Rat  1063 TCVQLHKRAEKIAVMLMERGHLQDGDHVALVYPPGIDLIAAFYGCLYAGCVPITVRPPH-PQNIA 1126

  Fly   169 RQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAIDFSELTSTQNVRYED 233
            ..|.         ||.....:|:::.|:..|:...::| |.|.|   .|:|..  |....:..:|
  Rat  1127 TTLP---------TVKMIVEVSRSACLMTTQLICKLLR-SREAA---AAVDVR--TWPLILDTDD 1176

  Fly   234 L--KAP----KEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPG 292
            |  |.|    |.::.|.:.:|.||..|||:..||.:||...::.|..::  |..:|...:.....
  Rat  1177 LPKKRPAQIYKPSNPDTLAYLDFSVSTTGMLAGVKMSHAATSAFCRSIK--LQCELYPSREVAIC 1239

  Fly   293 VLPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQ 357
            :.|:   .||..|:      .|..:.               |.|....|:||..|          
  Rat  1240 LDPY---CGLGFVL------WCLCSV---------------YSGHQSILIPPSEL---------- 1270

  Fly   358 ETAPHLKVVMSGAAPIGQHDV-ERFLNKFPNTVFKQGYG---------------------MTEAS 400
            ||.|.|.::     .:.|:.| :.|.:.....:..:|.|                     :.|..
  Rat  1271 ETNPALWLL-----AVSQYKVRDTFCSYSVMELCTKGLGSQTESLKARGLDLSRVRTCVVVAEER 1330

  Fly   401 PVVLLTPEGNKVYASTGV----------------------------------------------- 418
            |.:.||...:|::...|:                                               
  Rat  1331 PRIALTQSFSKLFKDLGLHPRAVSTSFGCRVNLAICLQPHRLWTLAEQGTSGPDPTTVYVDMRAL 1395

  Fly   419 ---------------LPASTEAKIVP-----LDGSDAKG-VGPRTTGELCVRGPQVMAGY--LNN 460
                           ||.....||:|     :...:.|| :|....||:.|......:||  :..
  Rat  1396 RHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGEIWVHSAHNASGYFTIYG 1460

  Fly   461 DEANQVTFYPGN---------WLRSGDVAFY------DEDG----LFYITDRMKELIKVKGFQVP 506
            ||:.|...:...         |.|:|.:.|.      |.:|    ..|:...:.|.::::|.:..
  Rat  1461 DESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGERHDALYVVGALDEAMELRGMRYH 1525

  Fly   507 PAELE-AVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERV--AHYKKL 568
            |.::| :|:|.|..:.|.|||...:..      .:||...|.:..|.::...|...|  .|| .:
  Rat  1526 PIDIETSVIRAHKSVTECAVFTWTNLL------VVVVELDGSEQEALDLVPLVTNVVLEEHY-LI 1583

  Fly   569 EGGVIFVD--EVPKNPTGKILRRELKEKF 595
            .|.|:.||  .:|.|..|:..|..|::.|
  Rat  1584 VGVVVVVDIGVIPINSRGEKQRMHLRDGF 1612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 129/612 (21%)
Firefly_Luc_like 99..587 CDD:213279 127/604 (21%)
Dip2cXP_038951677.1 DMAP_binding 8..174 CDD:368923
Dip2 392..968 CDD:341231
Dip2 1048..1622 CDD:341231 130/614 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.