DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and Acsm2

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001171448.1 Gene:Acsm2 / 233799 MGIID:2385289 Length:600 Species:Mus musculus


Alignment Length:563 Identity:130/563 - (23%)
Similarity:227/563 - (40%) Gaps:99/563 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 WRDFKKWERRTAAVCVI------TDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPE 140
            |...:|..:|::...:.      .:.:::|.::.:||...|..|.....|.:.|.:|:.||.:||
Mouse    79 WASVEKAGKRSSGPALWWMNGSGKEIKWSFRELSEASKQTANVLSGACGLHRGDRVAVVLPRIPE 143

  Fly   141 YPIATLGAIEAGLTVTTVNPVYTP-------DEIARQLTFSGAKFLVGTVSGFATLSQASKLVGR 198
            :.:..||.:..||       |:.|       .:|..:|..|.|:.:|..    ..::|....|..
Mouse   144 WWLMILGCMRTGL-------VFMPGTIQMRSSDILYRLQASKARAIVAG----DEVAQEVDAVAP 197

  Fly   199 QIPIAVVRTSAEEALPEGAIDFSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVML 263
            ......::....|...||.::|..|....:..::.::.....||    .:.|:|||:|.||....
Mouse   198 DCSFLKIKLLVSENSREGWLNFKALLKEASTIHQCVETESRESA----AIYFTSGTSGPPKMAEH 258

  Fly   264 SHNNITSNCEQVQASLP-----------------LDLMGP--QNTLPGVLPFFHIYGLTVVMLSK 309
            ||.::....:...||..                 ::::|.  :..:.|...|.|:          
Mouse   259 SHCSLGIKAKMDAASWTGLSTSDIIWTISDTAWIMNILGAFLEPWVLGACIFVHL---------- 313

  Fly   310 LGQGCRLATMPCFKPDDFMRSLDKYQGSILNLV-PPIALFMINHPKLTQETAPHLKVVMSGAAPI 373
                     :|.|.....::.|..|  .|..|| .||...|:....|:....|||....||...:
Mouse   314 ---------LPKFDSQTVLKVLSSY--PINTLVGAPIIYRMLLQQDLSSYKFPHLHSCFSGGETL 367

  Fly   374 GQHDVERFLNKFPNTVFKQGYGMTEASPV--VLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAK 436
            ....:|.:..| .....::.||.||...:  |..|.:....|..|..  |..:.:::     |.:
Mouse   368 LPETLENWKAK-TGLEIREIYGQTETGLICRVSRTMKVKPGYLGTAF--AHYDVQVI-----DEQ 424

  Fly   437 G--VGPRTTGELCVRGPQV-----MAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRM 494
            |  :.|...|::.:|...:     .:||::|.:..|.......|| .||....|.:|.|:...|.
Mouse   425 GNVLPPGKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDFWL-MGDRGIKDPEGYFHFIGRS 488

  Fly   495 KELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLR-QGEKASAEEISAYV 558
            .::|...|:::.|:|:|..|.:||.:.|.||...|....||..:|.|||. :......::::..:
Mouse   489 DDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVVLAPEFLSHDRDQLTKVL 553

  Fly   559 AERV----AHYK---KLEGGVIFVDEVPKNPTGKILRRELKEK 594
            .|.|    |.||   |:|    ||.::||..||||.|.:|:.|
Mouse   554 QEHVKSVTAPYKYPRKVE----FVLDLPKTVTGKIERAKLRAK 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 130/563 (23%)
Firefly_Luc_like 99..587 CDD:213279 123/531 (23%)
Acsm2NP_001171448.1 Acs 65..591 CDD:223442 129/560 (23%)
AFD_class_I 66..594 CDD:302604 130/563 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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