DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acs-12

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_508035.1 Gene:acs-12 / 180375 WormBaseID:WBGene00009106 Length:550 Species:Caenorhabditis elegans


Alignment Length:542 Identity:158/542 - (29%)
Similarity:258/542 - (47%) Gaps:53/542 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IPNVPLHEYVWRDFKKWERRTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLP 136
            ||:...|::::.:::|:....|.:...|..|:||..:.. .|.|..:......::|.:|:.:.:.
 Worm    12 IPDKTFHDFLFHEWEKFREDVALIDNDTFAQFTFQDVMQ-KADFIAKSLVYLKVEKSEVVLLVMD 75

  Fly   137 NLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIP 201
            ..|......|||..||..:..|:|.....|:...:..|.::|:.....|...:.:..|.:.|:..
 Worm    76 WSPAAIYIALGASMAGAAIQVVSPKLQAWEMQFPVKESESRFVFSDPLGLHEIDKLMKTLNREYR 140

  Fly   202 IAVVRTSAEEALPEGAIDFSE---------LTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGL 257
            |          :..|:.||:.         ..:.||     |..||.....|:|:||:|||..|.
 Worm   141 I----------ICTGSRDFANGYPIIEDLAFAAKQN-----LPLPKIEPDTDIVYLPYSSGIHGK 190

  Fly   258 PKGVMLSHNNI---------TSNCEQVQASLPLDLMGPQNTLPGVLPFFHIYGLTVVMLSKLGQG 313
            .||::.:|..:         ||...:.:..         :|...::|.....||..::.:.| .|
 Worm   191 RKGIVTTHKVMVAKTMVMWNTSKHHEFRRG---------DTTLTMIPLHKQCGLDAILCALL-NG 245

  Fly   314 CRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDV 378
            ..:.|...|....||..:.:|:...::|.|.:...|:...:........|:.|::||..:.:...
 Worm   246 LTVVTEKNFCVHTFMTCIQRYKIRAVHLTPYLMNLMMFEAENHTYNIESLEWVVTGADAVTEELY 310

  Fly   379 ERFLNKFPNT-VFKQGYGMTEASPVVLLTPEGNKVYA-STGVLPASTEAKIVPLDGSDAKGVGPR 441
            |.|...||:. ...|.|||||   |.|:....||.|: |.|.|.|:.|.|:  ||....|.:|||
 Worm   311 EEFTEIFPSVKTVTQTYGMTE---VGLICRTYNKNYSPSCGQLTANLEMKV--LDILTGKELGPR 370

  Fly   442 TTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVP 506
            ..|::||:|....:.||||.:|.:..|..| |.|:||:.|:||:|..::.|::||:|||.|:||.
 Worm   371 EKGQICVKGIAAESPYLNNPKATEEHFLDG-WRRTGDIGFFDEEGNVHLVDKLKEMIKVFGYQVI 434

  Fly   507 PAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYKKLEGG 571
            |.|:|.:|..|..:.||||..|.:|.:||.|.|.|||::|..|:.:::..||.:||..||.|. .
 Worm   435 PKEIETLLLTHQAVEEAAVVAINNELSGERPVAFVVLKKGFVATEDDLKDYVNKRVIRYKHLV-R 498

  Fly   572 VIFVDEVPKNPTGKILRRELKE 593
            |.....:||:..|.:|||.|.|
 Worm   499 VNITQFLPKSACGTLLRRLLAE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 156/537 (29%)
Firefly_Luc_like 99..587 CDD:213279 148/507 (29%)
acs-12NP_508035.1 PLN02246 2..518 CDD:215137 156/538 (29%)
Firefly_Luc_like 33..514 CDD:213279 149/513 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

Return to query results.
Submit another query.