DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acs-14

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_505451.1 Gene:acs-14 / 179330 WormBaseID:WBGene00008669 Length:544 Species:Caenorhabditis elegans


Alignment Length:564 Identity:209/564 - (37%)
Similarity:298/564 - (52%) Gaps:48/564 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PEDGYYKTSPFDPVTIPNVPLHEYVWRDFKK----WERRTAAVCVITDRQY-TFAQMRDASAAFA 116
            |.|     |.:.||.|...|.||.:.....|    .:.:.|.|.....:.: ||.|:|  ..|||
 Worm     2 PHD-----STYPPVKISERPYHEMLLDAIDKTIADGKNKIAFVSGDNPKHFITFEQLR--KDAFA 59

  Fly   117 VRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVG 181
            |.:.......|.||.|:.|||:..|....:|....|..|:..:.::|..|:.||...|.|| :|.
 Worm    60 VAMYLHSIGFKKDVAAVVLPNVWHYTSFFIGCAINGGAVSGASALFTDYELQRQFVDSRAK-VVF 123

  Fly   182 TVSGFATLSQASKLVGRQIP----IAVVRTSAEEALPEGAIDFSELTSTQNVRYEDLKAPKEASA 242
            |...|.   ....|..:|.|    |.|:......:||.|.:.::|:.||      .:.|..:...
 Worm   124 TYEDFL---PKVLLAVKQSPNIQKIIVIPKPVGSSLPAGVVSWNEVVST------PVTALPQVPI 179

  Fly   243 D---DMVFLPFSSGTTGLPKGVMLSHNNITSNCEQ---VQASLPLDLMGP------QNTLPGVLP 295
            |   |::.||:||||||.||||||||.|.||....   :..|..||::.|      :..|. .||
 Worm   180 DVHNDLLVLPYSSGTTGPPKGVMLSHYNFTSMISMYLAIDKSHILDVLDPNWDCYNEKALL-FLP 243

  Fly   296 FFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETA 360
            |:|:||..::....| :|.....|..|:|::|:.::..|:...|.|||||.:|:..||...:...
 Worm   244 FYHVYGFGLLNHCLL-KGMTGIVMSHFEPNNFLTAVQNYKVRCLCLVPPIMVFLAKHPICDKFDL 307

  Fly   361 PHLKVVMSGAAPIGQHDVERFLNKFPNTVF-KQGYGMTEASPVVLLTPE--GNKVYASTGVLPAS 422
            ..::::|:||||.|:..:|....|:.|..: :|||||||.|....| |:  .::.|.|.|.|.::
 Worm   308 SSVQMIMAGAAPAGKDLIEELKRKYTNLKYIQQGYGMTECSMASHL-PDLRNDQPYGSVGKLASN 371

  Fly   423 TEAKIVPLDGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGL 487
            ...|||.......:.|..|  ||:|||||.:|.|||...||...|...| ||.:||:.:.:|||.
 Worm   372 LVMKIVEPGTDREQPVNQR--GEICVRGPTIMLGYLGRPEATASTVIDG-WLHTGDIGYLNEDGN 433

  Fly   488 FYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAE 552
            .:|.||:||||||||.||||||||.:|..||||.:.||.|||....||.|:|.|| |.....:.:
 Worm   434 LFIVDRLKELIKVKGLQVPPAELEDLLLSHPKIRDCAVIGIPDAKAGELPKAFVV-RADNTLTEQ 497

  Fly   553 EISAYVAERVAHYKKLEGGVIFVDEVPKNPTGKILRRELKEKFS 596
            |:..:|..:|:.||:|||||.|::|:||:..||||||.|:::.|
 Worm   498 EVKDFVKPKVSPYKQLEGGVEFIEEIPKSAAGKILRRFLRDRSS 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 201/541 (37%)
Firefly_Luc_like 99..587 CDD:213279 191/507 (38%)
acs-14NP_505451.1 CaiC 12..539 CDD:223395 203/545 (37%)
Firefly_Luc_like 37..532 CDD:213279 193/513 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166729
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R434
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.690

Return to query results.
Submit another query.