DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acs-21

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_503845.1 Gene:acs-21 / 178751 WormBaseID:WBGene00016849 Length:517 Species:Caenorhabditis elegans


Alignment Length:518 Identity:131/518 - (25%)
Similarity:212/518 - (40%) Gaps:55/518 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VCVITD-RQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTV 158
            |..|.| |:.|:......:..:|..|..|:.::|.|.:...:....:........::.|.....|
 Worm    39 VLFIDDGRKITYGDFVQRAGQYATALTEKYKIKKGDRVMARVSKTTDTAALYAACLQIGALYVPV 103

  Fly   159 NPVYTPDEIARQLTFSGAKFLV---GTVSGFATLSQASKLVGRQIPIAVV--RTSAEEALPEGAI 218
            ||..|..|.|..:..:.....:   ......|...:..|.|....|:.|:  :..|:||....|.
 Worm   104 NPALTQSEAAHYVKDAKPSLWITCKDDADQIAMFQRVLKTVCIDNPVEVINEKVLADEAGKRKAC 168

  Fly   219 DFSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDL 283
            ...|.....|.                ..:.|:|||||.|||.:|||..:|:|..    :|..:.
 Worm   169 TMIEHVEKSNA----------------ATICFTSGTTGAPKGAVLSHGALTNNTN----ALVQEW 213

  Fly   284 MGPQNTLP-GVLPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIAL 347
            ...:|.:. ..||.||.:||...:...|.....:...|.|..:|..:.|.  ..::...||....
 Worm   214 GFTENDVNLHCLPIFHAHGLYFSLHCSLFSHSSVIWRPNFDAEDCSKHLK--NATVFMGVPTFYS 276

  Fly   348 FMINHPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKV 412
            .::......:|:...:::.:||:||:....:|.| .|....|..:.||||||. |:...|...|.
 Worm   277 RLLATNNFNKESFEKIRLFISGSAPLSVPTLEEF-EKRTGQVILERYGMTEAG-VIASNPLKGKR 339

  Fly   413 YASTGVLPASTEAKIVPLDGSDAKGVGPRTT--GELCVRGPQVMAGYLNNDEANQVTFYPGNWLR 475
            .|.|              .|...|||..|.|  ||:.::...:.:.|..|.|..:..|....|.:
 Worm   340 KAGT--------------VGQALKGVQCRVTENGEIEIKSDSIFSEYWKNPEKTKEEFTEDGWFK 390

  Fly   476 SGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAI 540
            :|||...|:||...|..|.|::|...|..:.|.|:|..:.....:.|:||...||...|||..|:
 Worm   391 TGDVGSLDKDGYLTIGGRSKDMIISGGENIYPKEIEDAIDSIEFVKESAVIAAPHPDFGEAVVAV 455

  Fly   541 VV---LRQGEKASAEEISAYVAERVAHYKKLEGGVIFVDEVPKNPTGK----ILRRELKEKFS 596
            ||   :.:.|:...|::...:.:::|.| |:...||.::|:|:|...|    |||....:.||
 Worm   456 VVPKNMVEDEQKFEEDLIEMLRKKLAKY-KVPKKVILLEELPRNHITKVRKDILRASYNKLFS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 129/515 (25%)
Firefly_Luc_like 99..587 CDD:213279 124/503 (25%)
acs-21NP_503845.1 MCS 38..505 CDD:213307 126/504 (25%)
PRK07514 40..517 CDD:181011 128/515 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R434
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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