DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acs-7

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_495979.1 Gene:acs-7 / 174472 WormBaseID:WBGene00007228 Length:540 Species:Caenorhabditis elegans


Alignment Length:548 Identity:171/548 - (31%)
Similarity:272/548 - (49%) Gaps:53/548 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PLHEYVWRDFK-KWERRTAAVCVITDRQYTFAQMRDASAAF------AVRLQTKF---NLQKPDV 130
            |:||.:...|| ..|:....|..:|      |:..|.|..|      .:::...|   ..:|.||
 Worm    14 PVHEVLLERFKVHQEKDPDNVAFVT------AENEDDSLGFQQLGKKVLQISEWFVENGYKKGDV 72

  Fly   131 LAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKL 195
            ..:...|......|.|||..|||.|:.....:|..|:..|:..|.::.::........:.:|.| 
 Worm    73 FLLASYNNWRCFAAALGAWRAGLIVSAAASQFTSFEMNYQIEDSQSQVILVDKHTLPVVQEACK- 136

  Fly   196 VGRQIPIAVVRTSAEEALPEGAIDFSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKG 260
             ..:....::..||..  |...|.|..||| :.||  :||.|.....:|:||||:||||||.|||
 Worm   137 -NLKFVKQIISISANP--PSPVIKFDVLTS-RLVR--NLKMPLIDPKNDIVFLPYSSGTTGKPKG 195

  Fly   261 VMLSHNNIT-----------SNCEQVQASLPLDLMGPQNTLPGVLPFFHIYGLTVVMLSKLGQGC 314
            ||:||.|.:           :|.:.:  .||.|.:.|.:.  ..||.:|..|:...:|:.. :|.
 Worm   196 VMISHLNFSMMLESSLRFFDANAKAI--GLPPDFVLPYDL--HFLPMYHAMGMFRTLLTSY-RGT 255

  Fly   315 RLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVE 379
            .......|..:..:::::||...:|:|||.||:.|:|.|.|.:.....|..|..|:||..:...:
 Worm   256 TQIMFTKFDMELMLKNIEKYSIMVLSLVPAIAVRMLNSPLLQKYDVSSLVSVTVGSAPFPESASK 320

  Fly   380 RFLNKFPNTVFKQGYGMTEASPVVLL----TPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGP 440
            :.....||....|||||||.:....|    :|:|     |.|.|...|..|:...||:..   ||
 Worm   321 KLKQLLPNVNIVQGYGMTELTFATHLQSPGSPDG-----SVGRLVPGTSMKVKKEDGTLC---GP 377

  Fly   441 RTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQV 505
            ...|||.::|||:|.||...::..........::|:||:.::|::|..:|.||:||||||...||
 Worm   378 HEIGELWIKGPQMMKGYWKKEQQTNELLDEHGFMRTGDIVYFDKNGETFICDRIKELIKVNAKQV 442

  Fly   506 PPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQG-EKASAEEISAYVAERVAHYKKLE 569
            .|||||:|:.:|..:.:..|||:....:||.|.|.||.::| :..:::.|..::.:::|.||.::
 Worm   443 APAELESVILEHDDVADVCVFGVDDASSGERPVACVVSKRGRDMETSKAIMKHINQKLARYKHIK 507

  Fly   570 GGVIFVDEVPKNPTGKILRRELKEKFSD 597
             .:.||.|:.:..|||:|||.:|:.|.|
 Worm   508 -EIEFVSEIMRTGTGKLLRRAMKKAFLD 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 168/543 (31%)
Firefly_Luc_like 99..587 CDD:213279 158/512 (31%)
acs-7NP_495979.1 CaiC 12..540 CDD:223395 171/548 (31%)
Firefly_Luc_like 35..524 CDD:213279 158/515 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815465 Normalized mean entropy S2257
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.640

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