DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acs-6

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_495450.1 Gene:acs-6 / 174156 WormBaseID:WBGene00022849 Length:565 Species:Caenorhabditis elegans


Alignment Length:532 Identity:172/532 - (32%)
Similarity:267/532 - (50%) Gaps:60/532 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 AVCVI----TDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLT 154
            |||.|    |.::..:..:.....:.|..| .|...:..||.:...||.||:.:|.|..::.|..
 Worm    35 AVCFIDAETTTKKKLYKDVEPTVNSLATAL-VKLGFKPGDVASQAFPNCPEFLVAMLAVMKCGGA 98

  Fly   155 VTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQA-SKLVG-------RQIPIAVVRTSAEE 211
            ::..:.::|..|:..|...|....:.......|.:.:| :|..|       |..|:   ||.   
 Worm    99 MSNASAIFTDYELQLQFCDSNTSIVFTDEDRLARIRRATAKCPGVRKIICLRTFPL---RTE--- 157

  Fly   212 ALPEGAIDFSELTSTQNVRYEDLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQ 276
             .||..:|:.|||.|     .|.......|.|.:..||:||||||.|||..|:|.||.:..:..:
 Worm   158 -FPENVLDYVELTQT-----PDQPINVNVSMDSIALLPYSSGTTGRPKGCQLTHRNIGAMLDVAK 216

  Fly   277 ASLPLD----LMG-------PQNTLPGVLPFFHIYGL-TVVMLSKLGQGCRLATMPCFKPDDFMR 329
            |.|..|    :.|       .::|:. :||::|.||| |:.....||.     |...||..|.:.
 Worm   217 AHLETDVAPAMFGKEKATWHKEHTVL-LLPWYHAYGLNTMFETILLGM-----TGIVFKKFDTIV 275

  Fly   330 SLDK---YQGSILNLVPPIALFMINHPKL-TQETAPHLKVVMSGAAPIGQHDVERFLNKFPNTVF 390
            .|::   |:..:..||||:.:|:...|.: ...|||.|||:||..|..|:...|....:|||...
 Worm   276 MLNRIKFYKVKLAWLVPPMLIFLAKDPMVPIFNTAPFLKVIMSAGATAGKQLCEEVSKRFPNAWL 340

  Fly   391 KQGYGMTEASPVVLLTP----EGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELCVRGP 451
            .|.|||||   :|..|.    |....:.:.|.|.::.|.||:..:..:...:  .|.|:||.|||
 Worm   341 CQAYGMTE---MVQFTTIPRFEDGNCFETVGNLASTYELKILDKEKKEITTI--NTVGQLCFRGP 400

  Fly   452 QVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRD 516
            .||.|||..:||:.:.  ...:|.:||:...|:.|..::|.|:||||||.|.||||.|:|.||..
 Worm   401 TVMKGYLKREEADIID--KDGFLLTGDLGSIDDKGRIHVTGRIKELIKVNGMQVPPVEIEDVLLL 463

  Fly   517 HPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYKKLEGGVIFVDEVPKN 581
            |||:.:.||.|:|.|..||:|:|.:| ::....:..|::.:|.::::.||.:: ...|:|.:||.
 Worm   464 HPKVKDCAVIGVPDEHKGESPKAYIV-KKDHTLTEAELTEFVRQKLSSYKWID-TYEFIDSIPKL 526

  Fly   582 PTGKILRRELKE 593
            |:|||.|::||:
 Worm   527 PSGKIQRKKLKK 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 172/532 (32%)
Firefly_Luc_like 99..587 CDD:213279 164/515 (32%)
acs-6NP_495450.1 CaiC 15..541 CDD:223395 172/532 (32%)
Firefly_Luc_like 37..532 CDD:213279 166/522 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54045
OrthoDB 1 1.010 - - D333840at33208
OrthoFinder 1 1.000 - - FOG0000951
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X154
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.790

Return to query results.
Submit another query.