DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and acs-16

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_490859.1 Gene:acs-16 / 171714 WormBaseID:WBGene00018579 Length:569 Species:Caenorhabditis elegans


Alignment Length:590 Identity:130/590 - (22%)
Similarity:219/590 - (37%) Gaps:130/590 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GYYKTSP-----FDPVTIPNVPLHEYVWRDFKKWER-RTAAVCVITDRQYTF----AQMRDASAA 114
            |..|..|     ||..|||.:        .:.|.|. |.|||........||    ::|...:|.
 Worm    19 GVSKAPPPKQIDFDSQTIPQL--------IYTKSEMDRVAAVFDSEKLSLTFSKIVSEMESLAAG 75

  Fly   115 FAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKF- 178
            |     ....|::.|.:.:...|..:..:..|....|||..:..||.| |:..:.:......:| 
 Worm    76 F-----LSIGLKQGDRVLVAGSNHSQVMLCALACSRAGLVFSLANPNY-PNSYSLKRALELGEFQ 134

  Fly   179 -----------------LVGTVSGFATLSQASKLVGRQIP-IAVVRTSAEEALPEGAIDFSELTS 225
                             |:..::.....|:..:|....:| :..|..:.|:....|....||:. 
 Worm   135 CIVCFRAHQYEADHLNNLLLEIAPELMRSRKGQLKSELLPKLTHVILAEEDHKHAGTFTLSEVF- 198

  Fly   226 TQNVRYEDLKAPKEA----------SADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLP 280
                    ||:.||.          |:..:..|.|:.||||.||.:.|||..:.:....|.|:..
 Worm   199 --------LKSSKEKIAKLPDFSKWSSHKLACLQFTLGTTGAPKLIALSHYQMLNGARAVAAAFG 255

  Fly   281 LDLMGPQNTLPGVLPFFHIYGLTVVMLSKLGQGCRL----ATMPCFKPDDFMRSLDKYQ------ 335
            ::   .::.|...||.|.|....::.||.....||:    || |.  |.:...|:.||:      
 Worm   256 IN---DKHVLACALPIFRIAIFNLICLSPFLTECRIIFPDAT-PL--PKNLFSSVSKYRCTTLLS 314

  Fly   336 -GSILNLVPPIA------------LFMINHPKLTQETAPHLKVVMSGAAPIGQHDVERFLNKFPN 387
             |:.|.|:..|:            :.:|. .::::|....:||.....                 
 Worm   315 NGAALRLLLKISQTQRVKLSALENILLIG-DRVSKEVLKLIKVQAENV----------------- 361

  Fly   388 TVFKQGYGMTEASPVVLLTPEGNKVYASTGVLPASTEAKIVPLDGSDAKGVGPRTTGELCVR--- 449
            .:...||.:||...:.|:..:.:....:.|...|..||.::|||||:.: |.....|:|.:|   
 Worm   362 KIIAVGYLLTETGSIPLMGDQNSDFTRNVGKAIAGYEAHLIPLDGSENQ-VETGKLGKLLIRVYY 425

  Fly   450 GPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVK-GFQVPPAELEAV 513
            |...| ||..:.:..:      .|:.:||:...||:|...:.....:||..| ...|....||.:
 Worm   426 GSTFM-GYAPDTKGKE------KWVDTGDIGRMDENGAIEVVASEDDLIYDKNNCLVEHWNLERL 483

  Fly   514 LRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASA---EEISAYVAERVAHYKKLEGGVIFV 575
            |..:..|....|..   ...|:...|:.|.|..:..:|   :|:.:...   :|:........||
 Worm   484 LNQNDLIKGVQVVS---RGRGQPVTAVCVARSTQFHAAKLKDELKSMCR---SHHFVAPDVFAFV 542

  Fly   576 DEVPK 580
            |:.|:
 Worm   543 DDFPR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 122/568 (21%)
Firefly_Luc_like 99..587 CDD:213279 116/545 (21%)
acs-16NP_490859.1 CaiC 35..565 CDD:223395 125/574 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815465 Normalized mean entropy S2257
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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