DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and Acsm1

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_006507277.1 Gene:Acsm1 / 117147 MGIID:2152200 Length:601 Species:Mus musculus


Alignment Length:426 Identity:93/426 - (21%)
Similarity:168/426 - (39%) Gaps:79/426 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HYSPEDGYYKTSPFDPVTIPNVPLHEYVWRDFKKWERR--TAAVCVITDR----QYTFAQMRDAS 112
            |.|||:..:.:...|            .|...::..:|  :.|...:..:    :::|.::||.:
Mouse    39 HDSPEEFNFASDVLD------------YWAQMEEEGKRGPSPAFWWVNGQGDEIKWSFRKLRDLT 91

  Fly   113 AAFAVRLQTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAK 177
            ...|...:....||:.|.||:.||.:||:.:.|:|.:..|:............:|..::..|.||
Mouse    92 CRTANVFEQICGLQQGDHLALILPRVPEWWLVTVGCMRTGIIFMPGTTQLKAKDILYRIQISRAK 156

  Fly   178 FLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAIDFSELTSTQNVRYEDLKAPKEASA 242
            .:|.|    |:|....:.|..:.|....:....:...||.:||..|..:.:..:..:|:..:   
Mouse   157 AIVTT----ASLVPEVESVASECPDLKTKLVVSDHSHEGWLDFCSLIKSASPDHTCIKSKMK--- 214

  Fly   243 DDMVFLPFSSGTTGLPKGVMLSHN------NITSNCEQVQASLPLDLMGPQNTLPGVLPFFHIYG 301
             |.:.:.|:|||||.||  |..||      :...:|.::......|::...:. ||     .|..
Mouse   215 -DPMAIFFTSGTTGYPK--MAKHNQGLAFRSYIPSCRKLLKLKTSDILWCMSD-PG-----WILA 270

  Fly   302 LTVVMLSKLGQGCR--LATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLK 364
            ....::.....||.  :..:|.|.|...:..|.||..:.. |..|....|:...|.:....|.|:
Mouse   271 TVGCLIEPWTSGCTVFIHHLPQFDPKVIVEVLFKYPITQC-LAAPGVYRMVLQQKTSNLRFPTLE 334

  Fly   365 VVMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVY--ASTGVLPAS-TEAK 426
            ...:|...:...:.|:         :||..|::.           ::||  :.||:..|: .|.|
Mouse   335 HCTTGGESLLPEEYEQ---------WKQRTGLSI-----------HEVYGQSETGISSATLREMK 379

  Fly   427 ---------IVPLDGS--DAKG--VGPRTTGELCVR 449
                     |:|.|..  |.||  :.|.|.|.:.:|
Mouse   380 IKRGSIGKAILPFDLQIIDEKGNILPPNTEGYIGIR 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 88/403 (22%)
Firefly_Luc_like 99..587 CDD:213279 85/379 (22%)
Acsm1XP_006507277.1 AFD_class_I 42..>429 CDD:388389 91/423 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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