DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdgy and Acsl3

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_476448.1 Gene:Acsl3 / 114024 RGDID:70552 Length:720 Species:Rattus norvegicus


Alignment Length:482 Identity:115/482 - (23%)
Similarity:193/482 - (40%) Gaps:117/482 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 QKPDV-LAICLPNLPEYPI----------------ATLG--AIEAGLTVTTVNPVYTPDEIARQL 171
            |||.. :||......|:.|                ||||  ||..||..|.|..:.|..|:.:  
  Rat   156 QKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIITSKELLQ-- 218

  Fly   172 TFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVV--RTSAEEALPEGAIDFSELTSTQNVRYE-- 232
                           ..|.....||.|...|..|  :.......|:|.| ...:.:.|.:..:  
  Rat   219 ---------------TKLKDIVSLVPRLRHIITVDGKPPTWSEFPKGVI-VHTMAAVQALGVKAD 267

  Fly   233 -DLKAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGVLPF 296
             |.||..:....|:..:.::||:||:|||||:||:||.::...:...:|  .:|.::...|.||.
  Rat   268 VDKKAHSKPLPSDIAVIMYTSGSTGIPKGVMISHSNIIASITGMARRIP--RLGEEDVYIGYLPL 330

  Fly   297 FHIYGLTVVMLSKLGQGCRLA---------------------------TMPCFKPDDFMRSLDKY 334
            .|:..|:..::. |..|||:.                           |:....|:    .:|:.
  Rat   331 AHVLELSAELVC-LSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPE----IMDRI 390

  Fly   335 QGSILNLVPPIALFMIN------HPKLTQET--------------------APHLKVVMSGAAPI 373
            ..:::|.|..::.|..|      :.|:.|.:                    ..:::|::.|.||:
  Rat   391 YKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGCSTPLCDRFVFRNVRRLLGGNIRVLLCGGAPL 455

  Fly   374 GQHDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVY-ASTGVLPASTEAKIVPLDGSDAKG 437
            .. ..:||:|........||||:||::....:|    :|: .:||.:.|......:.|...:..|
  Rat   456 SA-TTQRFMNICFCCPVGQGYGLTESTGAGTIT----EVWDYNTGRVGAPLVCCEIKLKNWEEGG 515

  Fly   438 V----GPRTTGELCVRGPQVMAGYLNNDEANQVTFYPG----NWLRSGDVAFYDEDGLFYITDRM 494
            .    .|...||:.:.|..|..||..|:...:..|:..    .||.:||:..:|.||...|.||.
  Rat   516 YFNTDKPHPRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRK 580

  Fly   495 KELIKVK-GFQVPPAELEAVLRDHPKI 520
            |:|:|:: |..|...::||.|::.|.|
  Rat   581 KDLVKLQAGEYVSLGKVEAALKNLPLI 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 115/482 (24%)
Firefly_Luc_like 99..587 CDD:213279 115/482 (24%)
Acsl3NP_476448.1 PLN02387 30..717 CDD:215217 115/482 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342847
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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