DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and dip2a

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_009302675.1 Gene:dip2a / 100332244 ZFINID:ZDB-GENE-091204-2 Length:1589 Species:Danio rerio


Alignment Length:619 Identity:127/619 - (20%)
Similarity:215/619 - (34%) Gaps:195/619 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 AVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAICLPNLPEYP----IATL-GAIEAGL 153
            |.||         |:...:...|:.|..:..|...|.:|:..|     |    |||. |.:.||.
Zfish  1035 ASCV---------QLHKRAERVALALMERGRLNAGDHVALLYP-----PGIDLIATFYGCLYAGC 1085

  Fly   154 TVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAI 218
            ...||.|.: |..:...|.         ||.....:|::..::..|..:.::::....|    |:
Zfish  1086 VPVTVRPPH-PQNLTTTLP---------TVKMIVEVSKSVCILTTQAIMKLLKSKEAAA----AV 1136

  Fly   219 DFSE---LTSTQNVRYEDL-KAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQASL 279
            |...   :..|.::..:.| :..|..|.:.:.:|.||..|||:..||.:||...::.|..::...
Zfish  1137 DIKAWPLILDTDDLPRKRLPQIYKPPSPEMLAYLDFSVSTTGILAGVKMSHAATSALCRSIKLQC 1201

  Fly   280 PLDLMGPQNTLPGVLPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPP 344
            .|   .|...:...|..:...|..:..|..:                       |.|....||||
Zfish  1202 EL---YPSRQIAICLDPYCGLGFALWCLCSV-----------------------YSGHQSILVPP 1240

  Fly   345 IALFMINHPKLTQETAPHLKVVMSGAAPIGQHDVE-RFLNKFPNTVFKQGYG------------- 395
            :.|          ||...|.:     :.:.|:.|. .|.:.....:..:|.|             
Zfish  1241 LEL----------ETNASLWL-----SAVSQYKVRVTFCSYSVMEMCTKGLGSQTEALRLRNVNL 1290

  Fly   396 --------MTEASPVVLLTPEGNKVYASTGV---------------------------------- 418
                    :.|..|.:.||...:|::...|:                                  
Zfish  1291 SCVRTCMVVAEERPRITLTQSFSKIFKDLGLSTRAVSTTFGCRVNVAVCLQGTAGPDPTTVYLDM 1355

  Fly   419 ------------------LPASTEAKIVP-----LDGSDAKG-VGPRTTGELCVRGPQVMAGY-- 457
                              ||.....||:|     :..::.|| :|....||:.|..|....||  
Zfish  1356 RALRHDRVRLVERGSPHSLPLMESGKILPGVKVIIANTETKGPLGDSHLGEVWVSSPHNATGYYT 1420

  Fly   458 ------LNNDEAN-QVTFYPGN----WLRSGDVAFY------DEDG----LFYITDRMKELIKVK 501
                  |:.|..| :::|  |:    |.|:|.:.|.      |..|    ..|:...:.|.::::
Zfish  1421 VYGEEALHADHFNTRLSF--GDTQTVWARTGYLGFLRRTELTDASGERHDALYVVGALDETLELR 1483

  Fly   502 GFQVPPAELE-AVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERV--A 563
            |.:..|.::| :|:|.|..|.|.|||...:..      .:||..:|.:..|.::.|.|...|  .
Zfish  1484 GMRYHPIDIETSVIRSHKSIAECAVFTWTNLL------VVVVELEGSEQEALDLVALVTNVVLEE 1542

  Fly   564 HYKKLEGGVIFVDE--VPKNPTGKILRRELKEKF 595
            || .:.|.|:.||.  :|.|..|:..|..|::.|
Zfish  1543 HY-LIVGVVVVVDPGVIPINSRGEKQRMHLRDGF 1575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 126/617 (20%)
Firefly_Luc_like 99..587 CDD:213279 121/604 (20%)
dip2aXP_009302675.1 DMAP_binding 19..132 CDD:283995
CaiC 349..927 CDD:223395
AFD_class_I 375..939 CDD:302604
AMP-binding 1009..1483 CDD:278902 97/518 (19%)
AFD_class_I 1026..1578 CDD:302604 127/619 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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