DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and acsbg1

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_001344904.2 Gene:acsbg1 / 100006023 ZFINID:ZDB-GENE-110914-219 Length:674 Species:Danio rerio


Alignment Length:625 Identity:153/625 - (24%)
Similarity:235/625 - (37%) Gaps:176/625 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PFDPVTIPNVPLHEYVWRDFKKWERRTAAVCVITDR--QYTFAQ----MRDASAAFAVRLQTKFN 124
            |..|:|:     |:..:...:|:...||......::  :.||.:    .|.|:..|     .|..
Zfish    52 PEQPITV-----HQMFYNSVQKYGNLTALASKRGNKWEKATFLEYYHLCRMAAKGF-----LKLG 106

  Fly   125 LQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATL 189
            |::...:||...|..|:.||.:|.:.||..:..:....:||........|.|..:|     ....
Zfish   107 LEQFHGVAILGFNSAEWFIAAVGTVFAGGIMAGIYTTNSPDACLHVANDSRANVIV-----VENQ 166

  Fly   190 SQASKL--VGRQIP--IAVVRTSA------------EEALPEGA----IDFSELTSTQNVRYEDL 234
            .|..|:  |..::|  .|:|:.|.            ||.:..|.    .:..|:.|.|.      
Zfish   167 KQLDKIMQVKDKLPHLKAIVQYSGSLKEKLANLYSWEEFMELGLEVSDHELDEVISKQR------ 225

  Fly   235 KAPKEASADDMVFLPFSSGTTGLPKGVMLSHNNIT------SNCEQVQASLPLDLMGPQNTLPGV 293
                   |:....|.::|||||.||||||||:|||      |....:|   |.::.  |.:|...
Zfish   226 -------ANQCCVLIYTSGTTGSPKGVMLSHDNITWTAHHASRAGDMQ---PAEIR--QESLVSY 278

  Fly   294 LPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSI---LNLVPPIA--------- 346
            ||..||    ...:..|..|.:......|...|.::      |::   |..|.|.|         
Zfish   279 LPLSHI----AAQIYDLWTGIKWGEQISFAQPDALK------GTLVDSLREVTPTAHMGVPRVWE 333

  Fly   347 -------------------------------------------LFMINHPKLTQETAPHLKV--- 365
                                                       ||.:....:.|:....|..   
Zfish   334 KIMEKIKEGISRCGYMKRKMVTWAMSVSLDANQRLKKDEEKSFLFTLAEKLILQKLRAELGFSSC 398

  Fly   366 --VMSGAAPIGQHDVERFLNKFPNTVFKQGYGMTEAS-PVVLLTPEGNKVYASTGVLPASTEAKI 427
              ..|||||||:..::.||..  |....:.|||:|.| |..:..||..: :.|.|.:....:.|:
Zfish   399 VKFFSGAAPIGRETLQFFLGL--NIRLYEAYGMSETSGPHFMSGPEAYQ-FLSCGKVVPGCQYKL 460

  Fly   428 VPL--DGSDAKGVGPRTTGELCVRGPQVMAGYLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYI 490
            :.:  |||          ||:|..|..|..|:||.::..:.......||||||:...||||..||
Zfish   461 ININADGS----------GEVCFWGRNVFMGFLNLEDKTKEALDEDGWLRSGDLGKVDEDGFIYI 515

  Fly   491 TDRMKELIKVKGFQ-VPPAELE-AVLRDHPKILEAAVFGIPHEF-----------NGEA--PRAI 540
            ..|:||||...|.: :||..:| ||.::...|..|.:.|...:|           |.|.  |..|
Zfish   516 NGRIKELIITAGGENIPPLPIEDAVKQELSIISNAMLIGDERKFLSMLLTLKCTVNPETTEPTDI 580

  Fly   541 VVL-------RQGEKAS-AEEISAYVAERVAHYKKLEGGV 572
            :.|       |.|.::: ..:|:....:.|  ||.:|.|:
Zfish   581 LSLEAVEFCQRIGSQSTKLSDITGGKDKLV--YKSIEDGI 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 150/614 (24%)
Firefly_Luc_like 99..587 CDD:213279 146/592 (25%)
acsbg1XP_001344904.2 FAA1 60..674 CDD:223953 149/612 (24%)
ACSBG_like 78..672 CDD:213299 146/594 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582952
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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