DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pdgy and slc27a2b

DIOPT Version :9

Sequence 1:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001373573.1 Gene:slc27a2b / 100004228 ZFINID:ZDB-GENE-081104-49 Length:616 Species:Danio rerio


Alignment Length:562 Identity:124/562 - (22%)
Similarity:213/562 - (37%) Gaps:107/562 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 YYKTSPFDPVTIPNVPLHEYVWRDFKKWERRTAAVCVITDRQYTFAQMRDASAAFAVRLQTKFNL 125
            |.|:.||  .||.: ...:.|.::.||      |.....|:.|::.|....|...|..|....:|
Zfish    42 YIKSKPF--YTILD-RFQDSVRKNPKK------AFIRFLDQTYSYEQSDKESNKIARTLLKHADL 97

  Fly   126 QKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLS 190
            .:.|.:|:.|.|.|.:....||..:.|.:|..:|.......:....|..||..|:          
Zfish    98 HEGDTVALLLGNEPMFLWIWLGLAKIGCSVALLNHNIRSKSLLHCFTCCGANVLI---------- 152

  Fly   191 QASKLVGRQIPIAVVRTSAEEALP---EGAIDFSELTS----------TQNVRY-EDLKAPKEAS 241
                 .|..:..||     ||.||   |..|....||.          |..::. .|...|.:..
Zfish   153 -----AGADLQDAV-----EEVLPALREQGISIYILTEHVSSEGMTSLTDKIKQASDQPIPTDLR 207

  Fly   242 ADDMVFLP----FSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGV--------- 293
            |:.....|    ::||||||||..:::|..:.:             |....::.||         
Zfish   208 ANVAFNTPAAYIYTSGTTGLPKAAVITHRRLWA-------------MAFFQSICGVKSDDVIYVC 259

  Fly   294 LPFFHIYGLTVVMLSKLGQGCRLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQE 358
            ||.:|..|..:.....:.:|..:.....|....|.....||..:::..:.....::.|.||...:
Zfish   260 LPLYHSSGFGLGFGGSVERGATIVLRSKFSSSQFWDDCRKYNVTVIQYIGETMRYLCNMPKCVSD 324

  Fly   359 TAPHLKVVM-SGAAPIGQHDVER-FLNKFPNTVFKQGYGMTEAS-----------PVVLLTPEGN 410
            ...::::.: :|..|    |:.| |:|:|.:...|:.||.||.:           .|..:.....
Zfish   325 QVHNVRMAIGNGIRP----DIWRTFINRFGHVEIKEFYGSTEGTLGFLNYAGKIGAVGTVNSFHK 385

  Fly   411 KVYASTGVLPASTEAKIVPLDGSD------AKGVGPRTTGELCVRGPQVM--AGYLNNDEANQV- 466
            |:|..  |.......|..|:..:|      |||    .||.|..|..|.:  :||..:.:..:. 
Zfish   386 KLYPY--VFIKFDHEKEEPVRNADGFCIEVAKG----ETGLLVTRLTQKIEFSGYARDPKQTEKK 444

  Fly   467 ----TFYPGN-WLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPAELEAVLRDHPKILEAAVF 526
                .|..|: :..:||:...|.:...|..||:.:..:.||..|...|:..::...|.|.||.|:
Zfish   445 KLHDVFEKGDVYFNTGDLFRTDRENFIYFQDRVGDTFRWKGENVSTNEVSDIMTLVPCIEEANVY 509

  Fly   527 GIP-HEFNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYKK 567
            |:. ..|.|....|.::|::..:...:::..:|...:..|.:
Zfish   510 GVTVPGFEGRIGMAAIILKKDHQFECDDVFNHVTSYLPVYAR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 118/546 (22%)
Firefly_Luc_like 99..587 CDD:213279 114/524 (22%)
slc27a2bNP_001373573.1 hsFATP2a_ACSVL_like 70..606 CDD:341261 114/525 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582967
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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