DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Flo2 and flot1

DIOPT Version :9

Sequence 1:NP_001259553.1 Gene:Flo2 / 32425 FlyBaseID:FBgn0264078 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001039106.1 Gene:flot1 / 733927 XenbaseID:XB-GENE-488586 Length:429 Species:Xenopus tropicalis


Alignment Length:447 Identity:188/447 - (42%)
Similarity:291/447 - (65%) Gaps:30/447 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HTTGPNEALIVSGGCCGSTKKRTIVGGWAWAWWLVTDVQRLSLNVMTLNPMCENVETSQGVPLTV 69
            :|.|||||::|||.|  .:....|.||..:....|..:||:|||.:|||...|.|.|..|||::|
 Frog     4 YTCGPNEAMVVSGFC--RSPPVMIAGGRVFVLPCVQQIQRISLNTLTLNVKSEKVYTRHGVPISV 66

  Fly    70 TGVAQCKIMKSSSYKQTDYHNDEMMNVYYFHHQADELLGTASEQFLGKSVKEIKQTILQTLEGHL 134
            ||:||.||                      ..|..|:|..|.:.||||:..|:.|..|:|||||.
 Frog    67 TGIAQVKI----------------------QGQNKEMLAAACQMFLGKTENEVAQISLETLEGHQ 109

  Fly   135 RAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLASLGKAQTAVVK 199
            |||:..:||||:||||.:|:..|.:||:.|:..|||.::|:|:||::||..||.|||||:||.|:
 Frog   110 RAIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQ 174

  Fly   200 RDADAGVAEANRDAGIREAECEKSAMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAY 264
            :||..|.|.|.:||||:||:..:..:..:|..:.::....|.::|:||.:|.|:||.||||.|||
 Frog   175 KDARIGEAVAKKDAGIKEAQAMQEKVSAQYVNEIEMAKAQRDFELKKAAYDLEVNTRKAESDLAY 239

  Fly   265 ELQAAKIRQRIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTLAQAKQC 329
            :||.||.:|:|..:::|::||||.:||:::.||:.||::||...:|.|||||.:||:.||:|::.
 Frog   240 QLQVAKTKQKIEEQKVQVQVVERAQQIQLQDQEISRKEKELEAKIKKPAEAERYRLEKLAEAERM 304

  Fly   330 QTIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQYGDAAIMNIVLESLPKIAAEV 394
            :.|..|.||||.||..|.|.|:|:|:..:|:||:|..||..:::|.||||::::||.||::|..:
 Frog   305 KLITEAEAEAEAIRVKGEALAYAVEVKARADAEQMAKKAEAFQEYQDAAIVDMLLEKLPEVAEAI 369

  Fly   395 AAPLAKTDEIVLI--GGND----NITNDVTRLVAQLPPSINALTGVDLSKVLSKIPG 445
            :.|:.:..:|.:|  ||::    .||.:|..::.:||.::..|||:::::...|.||
 Frog   370 SKPMTEVKKIKMISSGGSEVGASKITGEVLDILNRLPDTVEKLTGININQAGHKKPG 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Flo2NP_001259553.1 SPFH_flotillin 34..201 CDD:259798 73/166 (44%)
PHB 110..281 CDD:214581 81/170 (48%)
SPFH_like <286..374 CDD:302763 40/87 (46%)
Flot 337..>410 CDD:292597 31/74 (42%)
flot1NP_001039106.1 YqiK 5..426 CDD:225177 186/444 (42%)
SPFH_flotillin 31..176 CDD:259798 73/166 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340567at33208
OrthoFinder 1 1.000 - - FOG0001627
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.