DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Flo2 and Flot1

DIOPT Version :9

Sequence 1:NP_001259553.1 Gene:Flo2 / 32425 FlyBaseID:FBgn0264078 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_073192.2 Gene:Flot1 / 64665 RGDID:70991 Length:428 Species:Rattus norvegicus


Alignment Length:440 Identity:184/440 - (41%)
Similarity:281/440 - (63%) Gaps:30/440 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAWWLVTDVQRLSLNVMTLNPMCENVETSQGVPLTVT 70
            |.|||||::|||.|  .:....:.||..:....:..:||:|||.:|||...|.|.|..|||::||
  Rat     4 TCGPNEAMVVSGFC--RSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVT 66

  Fly    71 GVAQCKIMKSSSYKQTDYHNDEMMNVYYFHHQADELLGTASEQFLGKSVKEIKQTILQTLEGHLR 135
            |:||.||                      ..|..|:|..|.:.||||:..||....|:|||||.|
  Rat    67 GIAQVKI----------------------QGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQR 109

  Fly   136 AILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLASLGKAQTAVVKR 200
            ||:..:||||:||||.:|:..|.:||:.|:..|||.::|:|:||::||..||.|||||:||.|::
  Rat   110 AIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQK 174

  Fly   201 DADAGVAEANRDAGIREAECEKSAMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAYE 265
            ||..|.|||.||||||||:.::..:..:..::.::....|.|:|:||.:|.|:||.:|::.|||:
  Rat   175 DARIGEAEAKRDAGIREAKAKQEKVSAQCLSEIEMAKAQRDYELKKATYDIEVNTRRAQADLAYQ 239

  Fly   266 LQAAKIRQRIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTLAQAKQCQ 330
            ||.||.:|:|..:.:|::||||.:|:.::.||:.|:::||...|:.|||||.:||:.||:|::.|
  Rat   240 LQVAKTKQQIEEQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYRLERLAEAEKAQ 304

  Fly   331 TIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQYGDAAIMNIVLESLPKIAAEVA 395
            .|..|.||||.:|..|.|||.|:....:||||:|..||..::.|.:||.::::||.||::|.|::
  Rat   305 LIMQAEAEAESVRMRGEAEAFAVGARARAEAEQMAKKAEAFQMYQEAAQLDMLLEKLPQVAEEIS 369

  Fly   396 APLAKTDEIVLIG------GNDNITNDVTRLVAQLPPSINALTGVDLSKV 439
            .||...::|.|:.      |...:|.:|..::::||.|:..||||.:|:|
  Rat   370 GPLTSANKITLVSSGSGTMGAAKVTGEVLDILSRLPESVERLTGVSISQV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Flo2NP_001259553.1 SPFH_flotillin 34..201 CDD:259798 72/166 (43%)
PHB 110..281 CDD:214581 81/170 (48%)
SPFH_like <286..374 CDD:302763 39/87 (45%)
Flot 337..>410 CDD:292597 30/78 (38%)
Flot1NP_073192.2 YqiK 4..424 CDD:225177 184/440 (42%)
SPFH_flotillin 30..175 CDD:259798 72/166 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2268
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340567at33208
OrthoFinder 1 1.000 - - FOG0001627
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.