DRSC/TRiP Functional Genomics Resources

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Protein Alignment Flo2 and flot1a

DIOPT Version :9

Sequence 1:NP_001259553.1 Gene:Flo2 / 32425 FlyBaseID:FBgn0264078 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_570988.1 Gene:flot1a / 561345 ZFINID:ZDB-GENE-020430-1 Length:438 Species:Danio rerio


Alignment Length:442 Identity:192/442 - (43%)
Similarity:286/442 - (64%) Gaps:30/442 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HTTGPNEALIVSGGCCGSTKKRTIVGGWAWAWWLVTDVQRLSLNVMTLNPMCENVETSQGVPLTV 69
            :|.|||||::|||.|  .:....|.||..:.:..|..:||:|||.:|||...:.|.|..|||::|
Zfish     3 YTCGPNEAMVVSGFC--RSPPVMISGGRVFVFPCVQQIQRISLNTLTLNVKSDKVYTRHGVPISV 65

  Fly    70 TGVAQCKIMKSSSYKQTDYHNDEMMNVYYFHHQADELLGTASEQFLGKSVKEIKQTILQTLEGHL 134
            ||:||.||                      ..|..::|..|.:.|||||..||....|:|||||.
Zfish    66 TGIAQMKI----------------------QGQNKQMLAAACQMFLGKSDSEIAHIALETLEGHQ 108

  Fly   135 RAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLASLGKAQTAVVK 199
            |||:..|||||:||||.:|:..|.:||:.|:..|||.::|:|:|||:||..||.|||||:||.|:
Zfish   109 RAIIAHLTVEEIYKDRKKFSEQVFKVASSDLVNMGISVVSYTLKDVHDDQDYLHSLGKARTAQVQ 173

  Fly   200 RDADAGVAEANRDAGIREAECEKSAMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAY 264
            :||..|.|:..|||.||||...:..:..:|..:.::....|.|:|:||.:|.|:.|.||||::||
Zfish   174 KDARIGEAKNKRDAVIREAHAMQEKVSAQYMNEIEMAKAQRDYELKKAIYDIEVFTKKAESEMAY 238

  Fly   265 ELQAAKIRQRIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTLAQAKQC 329
            :||.||.:|||..|::|:.||||.:||.::.||:.||::||...||.|||||.:||:.||:|::.
Zfish   239 QLQVAKTKQRIEEEKMQVLVVERSQQITLQEQEISRKEKELEAKVKKPAEAERYRLEKLAEAERL 303

  Fly   330 QTIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQYGDAAIMNIVLESLPKIAAEV 394
            |.|..|.||||.||..|.|||:|:|..|:||||:|..||..::.|.:.|:::::||.||.:|.|:
Zfish   304 QLIMEAEAEAESIRVRGEAEAYAVEAKGRAEAEQMAKKAEAFQHYKEGAMVDMLLEKLPMMADEI 368

  Fly   395 AAPLAKTDEIVLI--GGND----NITNDVTRLVAQLPPSINALTGVDLSKVL 440
            :.||:.|:::.::  ||::    .:|.:|..::.:||.:|..||||::|:.:
Zfish   369 SKPLSATNKVTMVSSGGSEIGAAKLTGEVLDIMTKLPETIEKLTGVNISQCI 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Flo2NP_001259553.1 SPFH_flotillin 34..201 CDD:259798 74/166 (45%)
PHB 110..281 CDD:214581 85/170 (50%)
SPFH_like <286..374 CDD:302763 45/87 (52%)
Flot 337..>410 CDD:292597 32/74 (43%)
flot1aNP_570988.1 YqiK 4..425 CDD:225177 192/441 (44%)
SPFH_flotillin 30..175 CDD:259798 74/166 (45%)
SPFH_like <241..337 CDD:302763 51/95 (54%)
Flot 308..>385 CDD:292597 32/76 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340567at33208
OrthoFinder 1 1.000 - - FOG0001627
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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