DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Flo2 and Flot1

DIOPT Version :9

Sequence 1:NP_001259553.1 Gene:Flo2 / 32425 FlyBaseID:FBgn0264078 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_032053.1 Gene:Flot1 / 14251 MGIID:1100500 Length:428 Species:Mus musculus


Alignment Length:440 Identity:185/440 - (42%)
Similarity:281/440 - (63%) Gaps:30/440 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAWWLVTDVQRLSLNVMTLNPMCENVETSQGVPLTVT 70
            |.|||||::|||.|  .:....:.||..:....:..:||:|||.:|||...|.|.|..|||::||
Mouse     4 TCGPNEAMVVSGFC--RSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVT 66

  Fly    71 GVAQCKIMKSSSYKQTDYHNDEMMNVYYFHHQADELLGTASEQFLGKSVKEIKQTILQTLEGHLR 135
            |:||.||                      ..|..|:|..|.:.||||:..||....|:|||||.|
Mouse    67 GIAQVKI----------------------QGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQR 109

  Fly   136 AILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLASLGKAQTAVVKR 200
            ||:..:||||:||||.:|:..|.:||:.|:..|||.::|:|:||::||..||.|||||:||.|::
Mouse   110 AIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQK 174

  Fly   201 DADAGVAEANRDAGIREAECEKSAMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAYE 265
            ||..|.|||.||||||||:.::..:..:..::.::....|.|:|:||.:|.|:||.:|::.|||:
Mouse   175 DARIGEAEAKRDAGIREAKAKQEKVSAQCLSEIEMAKAQRDYELKKATYDIEVNTRRAQADLAYQ 239

  Fly   266 LQAAKIRQRIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTLAQAKQCQ 330
            ||.||.:|:|..:.:|::||||.:|:.::.||:.|:::||...|:.|||||.:||:.||:|::.|
Mouse   240 LQVAKTKQQIEEQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYRLERLAEAEKAQ 304

  Fly   331 TIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQYGDAAIMNIVLESLPKIAAEVA 395
            .|..|.||||.:|..|.|||.||....:||||:|..||..::.|.:||.::::||.||::|.|::
Mouse   305 LIMQAEAEAESVRMRGEAEAFAIGARARAEAEQMAKKAEAFQMYQEAAQLDMLLEKLPQVAEEIS 369

  Fly   396 APLAKTDEIVLIG------GNDNITNDVTRLVAQLPPSINALTGVDLSKV 439
            .||...::|.|:.      |...:|.:|..::::||.|:..||||.:|:|
Mouse   370 GPLTSANKITLVSSGSGTMGAAKVTGEVLDILSRLPESVERLTGVSISQV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Flo2NP_001259553.1 SPFH_flotillin 34..201 CDD:259798 72/166 (43%)
PHB 110..281 CDD:214581 81/170 (48%)
SPFH_like <286..374 CDD:302763 40/87 (46%)
Flot 337..>410 CDD:292597 31/78 (40%)
Flot1NP_032053.1 YqiK 4..424 CDD:225177 185/440 (42%)
SPFH_flotillin 30..175 CDD:259798 72/166 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2268
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4089
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340567at33208
OrthoFinder 1 1.000 - - FOG0001627
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.770

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