DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Flo2 and LOC100490322

DIOPT Version :9

Sequence 1:NP_001259553.1 Gene:Flo2 / 32425 FlyBaseID:FBgn0264078 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_031758597.1 Gene:LOC100490322 / 100490322 -ID:- Length:525 Species:Xenopus tropicalis


Alignment Length:477 Identity:222/477 - (46%)
Similarity:307/477 - (64%) Gaps:59/477 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 STKKRTIVGGWAWAWWLVTDVQ-RLSLNVMTL----NPMCENVETSQGVPLTVTGVA-------- 73
            |.:||..:.|         |.| :|...:|.|    ||..:......|:.::.|...        
 Frog    58 SRQKRVFLPG---------DKQLKLQSFIMRLKVSHNPKVQTCMRVLGLMVSATEAVPYAQFHHH 113

  Fly    74 --QCKIM----KSSSYKQTDYHN------DEMMNVY------YFHHQADELLGTASEQFL----- 115
              |..|:    :||.:::..:..      :..:|.|      .|...:.:::.|||...:     
 Frog   114 PLQATILRRWRRSSLHQRISFSRGIKRSLEWWLNPYRLSEGRIFTKPSWQIVTTASRDIISGLVV 178

  Fly   116 -GKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIK- 178
             |:|....:.:..|:.......:..|||||::.:||||||.||||||||||||||||||||||| 
 Frog   179 SGRSSSTDQSSRNQSNSPSPTVLARTLTVEQISQDRDQFAKLVREVAAPDVGRMGIEILSFTIKN 243

  Fly   179 ---------DVYDDVQYLASLGKAQTAVVKRDADAGVAEANRDAGIREAECEKSAMDVKYSTDTK 234
                     |||:.|:||:||||||||.|:||||.|||||.||||||||.|::..:||||..|||
 Frog   244 LPRSPFSLRDVYNKVEYLSSLGKAQTAAVRRDADIGVAEAERDAGIREALCKREMLDVKYLADTK 308

  Fly   235 IEDNTRMYKLQKANFDQEINTAKAESQLAYELQAAKIRQRIRNEEIQIEVVERRKQIEIESQEVQ 299
            :.|:.|.:::|||.|.||:||.|||:||||||||||.:|:||.|||:|:||:|:|||:||.:|:.
 Frog   309 MADSKREFEMQKAGFSQEVNTKKAEAQLAYELQAAKEQQKIRQEEIEIKVVQRKKQIDIEEKEIV 373

  Fly   300 RKDRELTGTVKLPAEAEAFRLQTLAQAKQCQTIEGARAEAERIRKIGSAEAHAIELVGKAEAERM 364
            |.|:||..||:.||||||:|:|.:|:.::.:.:..|:||||:|||||.|||..|:.:||||||:|
 Frog   374 RMDKELIATVRRPAEAEAYRMQQIAEGEKVKQVLYAQAEAEKIRKIGDAEAATIKAIGKAEAEKM 438

  Fly   365 RMKAHVYKQYGDAAIMNIVLESLPKIAAEVAAPLAKTDEI-VLIGGNDNITNDVTRLVAQLPPSI 428
            ::||..|:|||:||.|.:|||.||:|||:|:|||||.||| :|.|.|..||.::.||:|::|.|:
 Frog   439 KLKAGAYQQYGEAAKMAMVLECLPQIAAKVSAPLAKVDEIGILSGDNSKITGEMNRLLAEVPASV 503

  Fly   429 NALTGVDLSKV--LSKIPGAKA 448
            .|||||||:|:  :.|..|..|
 Frog   504 QALTGVDLTKIPLIQKATGILA 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Flo2NP_001259553.1 SPFH_flotillin 34..201 CDD:259798 71/213 (33%)
PHB 110..281 CDD:214581 107/186 (58%)
SPFH_like <286..374 CDD:302763 46/87 (53%)
Flot 337..>410 CDD:292597 48/73 (66%)
LOC100490322XP_031758597.1 YqiK <200..514 CDD:225177 192/313 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 148 1.000 Domainoid score I4431
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52449
OrthoDB 1 1.010 - - D340567at33208
OrthoFinder 1 1.000 - - FOG0001627
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13806
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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