DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eo and Gld

DIOPT Version :9

Sequence 1:NP_572986.1 Gene:Eo / 32423 FlyBaseID:FBgn0030597 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster


Alignment Length:587 Identity:184/587 - (31%)
Similarity:292/587 - (49%) Gaps:80/587 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 YDYIVVGAGSAGSIVASRLSELCQVKVLLLEEGQLPPLESEIFGL-TGALHHDERYMFLEEAVPN 153
            ||:||:|.|||||:|||||||:.|.||||:|.|...|:.::|..: ...:..|..|.:..|  |.
  Fly    65 YDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTE--PE 127

  Fly   154 PKCCQAMASM-HGCVWWHGRMMGGGGAINGNIFIPGSRENFRRW---NSTGWDWTQVHKTYSRLQ 214
            |..|  ::|| ..|.|..|:::||...:||.:::.|:||::..|   .:.||.:..|...:.:.:
  Fly   128 PMAC--LSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSE 190

  Fly   215 QRLNPSYLQPNKLNLKLANLIYSGSAELGVPRMKQPLIAGATFGYTHH------------VPVTV 267
            ..|:...: ..:.:.| ..|:..|......|.....|.||...|::.|            ..:|.
  Fly   191 DNLDLDEV-GTEYHAK-GGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTA 253

  Fly   268 NQRRRASSARLYLANDQVNRRGNLKVIRGAQVQRVLLNAAGSRATGVIYTLN--GVE------HT 324
            ....|.||||.:|.  ....|.||.::......::|::.         :|.|  |||      .|
  Fly   254 RNGIRYSSARAFLR--PARMRNNLHILLNTTATKILIHP---------HTKNVLGVEVSDQFGST 307

  Fly   325 AKTL--GEVILSAGTLNSAKLLLLSGIGPREELQRWNITTHQDLP-VGRNLQDHGMMPLFLLFGS 386
            .|.|  .||:||||.:||..:|||||:||::|||:.|:.|..:|| ||:||.:|      :.:.:
  Fly   308 RKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNH------VTYFT 366

  Fly   387 NCAVNSTRDPTENPYAPVSITQYLLDNQKGPLASGFYMMGYINSSSPSSSR-----GEPDLHVVA 446
            |..::   |....|....:..:|||  .:..|.||   .|..:.::..::|     ..|||.:..
  Fly   367 NFFID---DADTAPLNWATAMEYLL--FRDGLMSG---TGISDVTAKLATRYADSPERPDLQLYF 423

  Fly   447 HTLLPKGSTGSFGYLGFRPELIQAQQDILQKGDLLQIMGSLLRPLSHGKVSLSSKNSADQAKIEN 511
            .           |||.......|..:.:......:||..::|.|.|.|.:.|.|.:..:..:|..
  Fly   424 G-----------GYLASCARTGQVGELLSNNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPRIVA 477

  Fly   512 HYGEAVEDQQTLLRYVRYIQKLSKTRPFRRCGLRLWKPPLHECDTLAADSDDYWLCYIRYFYVGA 576
            :|....:|.:||:..::::.:||:|.|.::.|:||.|..:..|:..|..||.||.|.:|......
  Fly   478 NYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPE 542

  Fly   577 WHSVGTCRMAPRKGVDSQENGGVVDERLRVHGVKGLRVVDASIMPELPAGNTNGPAMMIGEKGAQ 641
            .|..|:|:|.|     |.:...||:..|||||::||||:|.||||::.:|||:.||:||.||||.
  Fly   543 NHQAGSCKMGP-----SHDPMAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAY 602

  Fly   642 MI 643
            ::
  Fly   603 LL 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EoNP_572986.1 BetA 88..649 CDD:225186 184/587 (31%)
NADB_Rossmann 185..375 CDD:304358 62/215 (29%)
GMC_oxred_C 490..638 CDD:282984 55/147 (37%)
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 22/29 (76%)
GMC_oxred_C 64..601 CDD:331873 182/582 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
98.970

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