DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eo and Chdh

DIOPT Version :10

Sequence 1:NP_572986.1 Gene:Eo / 32423 FlyBaseID:FBgn0030597 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_758468.2 Gene:Chdh / 218865 MGIID:1860776 Length:596 Species:Mus musculus


Alignment Length:632 Identity:196/632 - (31%)
Similarity:275/632 - (43%) Gaps:126/632 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 AWPLQHE--PPEDR----LEIESYDYIVVGAGSAGSIVASRLSELCQVKVLLLEEGQLPPLESEI 131
            ||.:|.:  ||..|    :..:.|.::||||||||.::||||:|....:|||||.|.    :..:
Mouse    20 AWAVQGQPCPPCSRAVASVGKDEYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGP----KDLL 80

  Fly   132 FG---LTGALHH---------DERYMFLEEAVPNPKCCQAMASMHGCV--WWHGRMMGGGGAING 182
            .|   |...:|.         |::|.:.....|.|       .|...|  |..||:.||..::|.
Mouse    81 MGSKRLQWKIHMPAALVSNLCDDKYNWYYHTEPQP-------GMDSRVLYWPRGRVWGGSSSLNA 138

  Fly   183 NIFIPGSRENFRRWN---STGWDWTQVHKTYSRLQQRLNPSYLQPNKLNLKLANLIYSGSAELGV 244
            .::|.|..|::.||:   :.|||:... ..|.|..||        ::|.   ||:...|...|.|
Mouse   139 MVYIRGHAEDYNRWHREGAEGWDYAHC-LPYFRKAQR--------HELG---ANMYRGGDGPLHV 191

  Fly   245 PRMK--QPL---------IAGATF-----GYTHH----VPVTVNQRRRASSARLYLANDQVNRRG 289
            .|.|  .||         .||..|     |:...    :.:||:|.:|.|:|..||  ..|..|.
Mouse   192 SRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYL--HPVLSRP 254

  Fly   290 NLKVIRGAQVQRVLLNAAGSRATGVIYTLNGVEHTAKTLGEVILSAGTLNSAKLLLLSGIGPREE 354
            ||:......|.|||..  |:||.||.|..:|..|.|....|||||.|.:||.:||:|||:|..::
Mouse   255 NLRAEVQTLVSRVLFE--GTRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADD 317

  Fly   355 LQRWNITTHQDLP-VGRNLQDHGMMPLFLLFGSNCAVNSTRDPTENPYAPVSI-----TQYLLDN 413
            |::.:|.....|| ||:|||||    |.:.....|....|....:.|...|.|     ..|..|.
Mouse   318 LRKLDIPVVCHLPGVGQNLQDH----LEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDG 378

  Fly   414 QKGPLASGFYMMGYINSSSPSSSRGEPDLHVVAHTLLPKGSTGSFGYLGFRPELIQAQQDILQKG 478
            ....|.:|    |:|. |.|.....:...|.:...::..|.         :|    .||      
Mouse   379 ATAHLETG----GFIR-SRPGVPHPDIQFHFLPSQVIDHGR---------KP----TQQ------ 419

  Fly   479 DLLQIMGSLLRPLSHGKVSLSSKNSADQAKIENHYGEA---VEDQQTLLRYVRYIQKLSKTRPFR 540
            :..|:....:|..|.|.:.|.|.|..|...|..:|...   |||.:..:|..|.|.......|||
Mouse   420 EAYQVHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFR 484

  Fly   541 RCGLRLWKPPLHECDTLAADSDDYWLCYIRYFYVGAWHSVGTCRMAPRKGVDSQENGGVVDERLR 605
              |..| :|..|      ..||.....::|.....|:|...||:|.     .|.:...|||.:.:
Mouse   485 --GKEL-QPGSH------VQSDKEIDAFVRAKADSAYHPSCTCKMG-----RSSDPTAVVDAQTK 535

  Fly   606 VHGVKGLRVVDASIMPELPAGNTNGPAMMIGEKGAQMI-----LDDR 647
            |.||:.||||||||||.:.:||.|.|.:||.||.|.:|     |:|:
Mouse   536 VIGVENLRVVDASIMPSVVSGNLNAPTVMIAEKAADIIKGHPALEDK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EoNP_572986.1 BetA 88..650 CDD:441878 190/611 (31%)
ChdhNP_758468.2 PRK02106 42..588 CDD:235000 190/610 (31%)

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