DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eo and Chdh

DIOPT Version :9

Sequence 1:NP_572986.1 Gene:Eo / 32423 FlyBaseID:FBgn0030597 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001129712.1 Gene:Chdh / 218865 MGIID:1860776 Length:596 Species:Mus musculus


Alignment Length:632 Identity:196/632 - (31%)
Similarity:275/632 - (43%) Gaps:126/632 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 AWPLQHE--PPEDR----LEIESYDYIVVGAGSAGSIVASRLSELCQVKVLLLEEGQLPPLESEI 131
            ||.:|.:  ||..|    :..:.|.::||||||||.::||||:|....:|||||.|.    :..:
Mouse    20 AWAVQGQPCPPCSRAVASVGKDEYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGP----KDLL 80

  Fly   132 FG---LTGALHH---------DERYMFLEEAVPNPKCCQAMASMHGCV--WWHGRMMGGGGAING 182
            .|   |...:|.         |::|.:.....|.|       .|...|  |..||:.||..::|.
Mouse    81 MGSKRLQWKIHMPAALVSNLCDDKYNWYYHTEPQP-------GMDSRVLYWPRGRVWGGSSSLNA 138

  Fly   183 NIFIPGSRENFRRWN---STGWDWTQVHKTYSRLQQRLNPSYLQPNKLNLKLANLIYSGSAELGV 244
            .::|.|..|::.||:   :.|||:... ..|.|..||        ::|.   ||:...|...|.|
Mouse   139 MVYIRGHAEDYNRWHREGAEGWDYAHC-LPYFRKAQR--------HELG---ANMYRGGDGPLHV 191

  Fly   245 PRMK--QPL---------IAGATF-----GYTHH----VPVTVNQRRRASSARLYLANDQVNRRG 289
            .|.|  .||         .||..|     |:...    :.:||:|.:|.|:|..||  ..|..|.
Mouse   192 SRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYL--HPVLSRP 254

  Fly   290 NLKVIRGAQVQRVLLNAAGSRATGVIYTLNGVEHTAKTLGEVILSAGTLNSAKLLLLSGIGPREE 354
            ||:......|.|||..  |:||.||.|..:|..|.|....|||||.|.:||.:||:|||:|..::
Mouse   255 NLRAEVQTLVSRVLFE--GTRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADD 317

  Fly   355 LQRWNITTHQDLP-VGRNLQDHGMMPLFLLFGSNCAVNSTRDPTENPYAPVSI-----TQYLLDN 413
            |::.:|.....|| ||:|||||    |.:.....|....|....:.|...|.|     ..|..|.
Mouse   318 LRKLDIPVVCHLPGVGQNLQDH----LEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDG 378

  Fly   414 QKGPLASGFYMMGYINSSSPSSSRGEPDLHVVAHTLLPKGSTGSFGYLGFRPELIQAQQDILQKG 478
            ....|.:|    |:|. |.|.....:...|.:...::..|.         :|    .||      
Mouse   379 ATAHLETG----GFIR-SRPGVPHPDIQFHFLPSQVIDHGR---------KP----TQQ------ 419

  Fly   479 DLLQIMGSLLRPLSHGKVSLSSKNSADQAKIENHYGEA---VEDQQTLLRYVRYIQKLSKTRPFR 540
            :..|:....:|..|.|.:.|.|.|..|...|..:|...   |||.:..:|..|.|.......|||
Mouse   420 EAYQVHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFR 484

  Fly   541 RCGLRLWKPPLHECDTLAADSDDYWLCYIRYFYVGAWHSVGTCRMAPRKGVDSQENGGVVDERLR 605
              |..| :|..|      ..||.....::|.....|:|...||:|.     .|.:...|||.:.:
Mouse   485 --GKEL-QPGSH------VQSDKEIDAFVRAKADSAYHPSCTCKMG-----RSSDPTAVVDAQTK 535

  Fly   606 VHGVKGLRVVDASIMPELPAGNTNGPAMMIGEKGAQMI-----LDDR 647
            |.||:.||||||||||.:.:||.|.|.:||.||.|.:|     |:|:
Mouse   536 VIGVENLRVVDASIMPSVVSGNLNAPTVMIAEKAADIIKGHPALEDK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EoNP_572986.1 BetA 88..649 CDD:225186 190/611 (31%)
NADB_Rossmann 185..375 CDD:304358 74/213 (35%)
GMC_oxred_C 490..638 CDD:282984 52/150 (35%)
ChdhNP_001129712.1 PRK02106 42..588 CDD:235000 190/610 (31%)
NAD_binding_8 47..>76 CDD:290186 18/28 (64%)
GMC_oxred_N 118..341 CDD:279121 83/242 (34%)
GMC_oxred_C 432..569 CDD:282984 53/150 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

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