DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eo and chdh-1

DIOPT Version :9

Sequence 1:NP_572986.1 Gene:Eo / 32423 FlyBaseID:FBgn0030597 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_495846.1 Gene:chdh-1 / 174390 WormBaseID:WBGene00007917 Length:599 Species:Caenorhabditis elegans


Alignment Length:620 Identity:154/620 - (24%)
Similarity:263/620 - (42%) Gaps:126/620 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 YIVVGAGSAGSIVASRLSELCQVKVLLLEEGQLPPLESEIFGLTGALHHDERYMFLEEAVPNPKC 156
            :|:|||||||.::|:||:|....:|||:|.|   |::.:   ....:|.....|:        ..
 Worm    40 HIIVGAGSAGCVLANRLTEDPSNRVLLIEAG---PVDHK---WDWRIHMPAALMY--------NL 90

  Fly   157 CQAMASMH------------GCVWWHGRMMGGGGAINGNIFIPGSRENFRRW---NSTGWDWT-- 204
            |....:.|            ...|..||:.||...:|...::.|...::.||   .::||::.  
 Worm    91 CSDTYNWHYHTTAQKNLGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANC 155

  Fly   205 ----QVHKTYSRLQQRLNPSYLQPNKLNLKLANLIYSGSAE-------LGVPRMKQPLIAGATFG 258
                :..:|||......:|.......|.:|      .|.||       |.|.: :.||      |
 Worm   156 LPYFKKAETYSDATGPNDPYRGNNGPLYVK------KGDAENPLHKAWLNVGK-EHPL------G 207

  Fly   259 YTHH-----------VPVTVNQRRRASSARLYLANDQVNRRGNLKVIRGAQVQRVLLNAAGSRAT 312
            :|:.           :.:|::...|.|:::.|:  ..:..|.||....|....|||.:.  ::|.
 Worm   208 WTNDMNGEKQEGISTMDMTIHNGERWSASKAYV--HPIRNRPNLITSSGITCTRVLFDT--NKAI 268

  Fly   313 GV--IYTLNGV------EHTAKTL---GEVILSAGTLNSAKLLLLSGIGPREELQRWNITTHQDL 366
            |:  |..||.|      .::.:.:   |:|||:.|.:|:.:||:|||:||.:.|:...|....:|
 Worm   269 GIEFIRKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANL 333

  Fly   367 P-VGRNLQDHGMMPLFLLFGSNCAVN-STRDPTENPYAPVSITQYLLDNQKGPLASGFYMMGYIN 429
            | ||:|||||  :.:::...|...|. ..:...:.|:..:.|......|:.|..||.....|...
 Worm   334 PGVGQNLQDH--LEIYVQQESTQPVTLYNKSSWKFPHNMIKIGLEWFTNRTGLGASSHLETGGFA 396

  Fly   430 SSSPSSSRGEPDLHVVAHTLLPKGSTGS--FGYLGFRPELIQAQQDILQKGDLLQIMGSLLRPLS 492
            .|..:.:..:...|.:..|:...|.|..  .||                     |:....:|..|
 Worm   397 RSDDTVTHPDIQFHFLPSTVHDDGRTNGTCHGY---------------------QVHVGPMRSQS 440

  Fly   493 HGKVSLSSKNSADQAKIENHYGEAVEDQQTLLRYVRYIQKLSKTRPFRRC-GLRLWKPPLHECDT 556
            .|.:.|.:|:......|..:|.|...|.:...:.:|..::|..::.|... |..|...|  :|.:
 Worm   441 KGYIMLQAKDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKELAPGP--DCQS 503

  Fly   557 LAADSDDYWLCYIRYFYVGAWHSVGTCRMAPRKGVDSQENGGVVDERLRVHGVKGLRVVDASIMP 621
             .||.|.    :::.....|:|...||:|    |.::.:...|..|.:.|:|.:.|:|||||:||
 Worm   504 -DADIDR----FVKEKAASAYHPSCTCKM----GSENDKMAVVNPETMGVYGTENLKVVDASVMP 559

  Fly   622 ELPAGNTNGPAMMIGEKGAQMI------LDDREAN 650
            .:.:||.|.|.:|:.|:.|.:|      |...:||
 Worm   560 SIVSGNLNAPVIMMAERAADLIKHKKQLLPPSDAN 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EoNP_572986.1 BetA 88..649 CDD:225186 152/617 (25%)
NADB_Rossmann 185..375 CDD:304358 59/228 (26%)
GMC_oxred_C 490..638 CDD:282984 41/148 (28%)
chdh-1NP_495846.1 PRK02106 41..599 CDD:235000 154/619 (25%)
NADB_Rossmann 41..>78 CDD:304358 18/42 (43%)
NADB_Rossmann 108..345 CDD:304358 67/255 (26%)
GMC_oxred_C 439..577 CDD:282984 42/148 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I4696
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.790

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