DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eo and chdh

DIOPT Version :9

Sequence 1:NP_572986.1 Gene:Eo / 32423 FlyBaseID:FBgn0030597 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_002663301.2 Gene:chdh / 100331020 ZFINID:ZDB-GENE-120111-1 Length:585 Species:Danio rerio


Alignment Length:629 Identity:187/629 - (29%)
Similarity:268/629 - (42%) Gaps:108/629 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IALNASSLALANNTAWPLQHEPPEDRL---EIESYDYIVVGAGSAGSIVASRLSELCQVKVLLLE 120
            :|..:||..|.::...||.|......:   ...||.|::|||||||.::||||:|.....|||||
Zfish     1 MACFSSSTRLMSSLCSPLLHHRYISTVVNKNTPSYSYVIVGAGSAGCVLASRLTENPSDSVLLLE 65

  Fly   121 EGQLPPLESEI--------FGLTGALHH---DERYMFLEEAVPNPKCCQAMASMHGCVWWHGRMM 174
            .|   |.:..:        ..:..||.:   |:||.:....:|     ||........|..||:.
Zfish    66 AG---PKDKHLGSTRLSWKIHMPAALTYNLCDDRYNWFYHTLP-----QAHMDDRVMYWPRGRVW 122

  Fly   175 GGGGAINGNIFIPGSRENFRRWNSTGWD-WTQVH-KTYSRLQQRLNPSYLQPNKLNLKLANLIYS 237
            ||..::|..::|.|..|::.||.|.|.| |...| ..|.|..|   ...|.|::..        .
Zfish   123 GGSSSLNAMVYIRGHAEDYNRWQSEGADGWNYDHCLPYFRKAQ---THELGPDRYR--------G 176

  Fly   238 GSAELGVPRMK--QPL-----IAGATFGYTH-------------HVPVTVNQRRRASSARLYLAN 282
            |...|.|.|.|  .||     .||...||.:             .:.:|:::.:|.|:|..||. 
Zfish   177 GDGPLHVSRGKTQNPLHYAFIQAGQQAGYPYTEDMNGFQQEGVGWMDMTIHKGQRWSTASAYLR- 240

  Fly   283 DQVNRRGNLKVIRGAQVQRVLLNAAGSRATGVIYTLNGVEHTAKTLGEVILSAGTLNSAKLLLLS 347
             ....|.||.......|.|||.:  |:||.||.|..||.........|||||.|.:||.:|||||
Zfish   241 -PALSRPNLSTEVRCMVTRVLFD--GARARGVEYQQNGQIKKVFAEKEVILSGGAINSPQLLLLS 302

  Fly   348 GIGPREELQRWNITTHQDLP-VGRNLQDHGMMPLFLLFGSNCAVNSTRDPTENPYAPVSI-TQYL 410
            |:|..:||:..:|...|.|| ||.|||||    |.|.....|....|....:.|...:.| .::|
Zfish   303 GVGNADELKTLDIPVVQHLPGVGCNLQDH----LELYVQHACTQPITLYRAQKPLQMLKIGLEWL 363

  Fly   411 LDNQKGPLASGFYMMGYINSSSPSSSRGE---PDL--HVVAHTLLPKGSTGSFGYLGFRPELIQA 470
            |.      .:|:....::.|.....||.:   ||:  |.:...::..|...|             
Zfish   364 LK------FTGYGATAHLESGGFIRSRPDVPHPDIQFHFLPSQVIDHGRVSS------------- 409

  Fly   471 QQDILQKGDLLQIMGSLLRPLSHGKVSLSSKNSADQAKIENHYGEAVEDQQTLLRYVRYIQKLSK 535
                  |.:..|:....:|..|.|.:.|.||:..|...::.:|.....|.......||..:::..
Zfish   410 ------KIEAFQVHVGPMRSTSVGWLKLKSKDPRDHPILQPNYLSTETDVLEFRECVRLTREIFA 468

  Fly   536 TRPFRRC-GLRLWKPPLHECDTLAADSDDYWLCYIRYFYVGAWHSVGTCRMAPRKGVDSQENGGV 599
            .:.|... |..:...|..:.|   |:.|    .::|.....|:|...||:|.     ..::...|
Zfish   469 QQAFDEFRGPEVQPGPAVQSD---AEID----AFVRQKADSAYHPSCTCKMG-----RPEDRMAV 521

  Fly   600 VDERLRVHGVKGLRVVDASIMPELPAGNTNGPAMMIGEKGAQMI 643
            |...|||.||:||||||||:||.:.:||.|.|.:||.||.|..|
Zfish   522 VSPELRVFGVEGLRVVDASVMPSMVSGNLNAPTIMIAEKAADAI 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EoNP_572986.1 BetA 88..649 CDD:225186 180/597 (30%)
NADB_Rossmann 185..375 CDD:304358 73/212 (34%)
GMC_oxred_C 490..638 CDD:282984 45/148 (30%)
chdhXP_002663301.2 PRK02106 30..585 CDD:235000 180/600 (30%)
NADB_Rossmann 38..>69 CDD:304358 18/33 (55%)
GMC_oxred_N 110..333 CDD:279121 81/241 (34%)
GMC_oxred_C 424..561 CDD:282984 46/148 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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