DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12398 and Gld

DIOPT Version :9

Sequence 1:NP_572985.1 Gene:CG12398 / 32422 FlyBaseID:FBgn0030596 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster


Alignment Length:623 Identity:242/623 - (38%)
Similarity:360/623 - (57%) Gaps:51/623 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TLGPSAMIILLLNKGILE----QRPDIVDEQHRVRSIHIEDLRESYDFIVIGGGSAGCVLAARLS 76
            |.|.||.::.:   |:||    .:.|:.|...|..|....:....||||||||||||.|:|:|||
  Fly    23 TCGGSAFMLFM---GLLEVFIRSQCDLEDPCGRASSRFRSEPDYEYDFIVIGGGSAGSVVASRLS 84

  Fly    77 ENPEWSVLLLEAGGDEPLLIDLPQLYPVFQRSPWDWKYLTEPSDRYCLAMEDQRCFWPRAKVLGG 141
            |.|:|.|||:|||||||:...:|.::..|..|..|::|.|||....||:..:|||:|||.|||||
  Fly    85 EVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYWPRGKVLGG 149

  Fly   142 CSSINAMMYIRGNRRDYDQWAALGNPGWNYDNILHYFRKLE---DMRVPGFEHSPYHGHGGPISV 203
            .|.:|.|||:||||.|||.|||.|||||.|:::|.:|:|.|   |:...|.|   ||..||.:.|
  Fly   150 TSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTE---YHAKGGLLPV 211

  Fly   204 ERYRFPSPLLDIFMRAAQQLGM-VHPDGDFNGRSQTGFAPPHGSLRDGLRCSANKGYIRRSWQRP 267
            .::.:..||....::|.::||. ||   |.||::.|||.....:.|:|:|.|:.:.::|.:..|.
  Fly   212 GKFPYNPPLSYAILKAGEELGFSVH---DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRN 273

  Fly   268 NLDIVLKAFVERIVIDPQSHRAIGVIF--EYGLLKHTVRAKREVILSAGSLASPQLLMVSGVGPR 330
            ||.|:|.....:|:|.|.:...:||..  ::|..: .:..|:||:||||::.||.:|::|||||:
  Fly   274 NLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTR-KILVKKEVVLSAGAVNSPHILLLSGVGPK 337

  Fly   331 DQLEPQGIPVVQHLPGVGGNLQDHISTSGAIYTFDSGQNRHLSFIVPEM----MNEQAVEDFVQG 391
            |:|:...:..|.:|||||.||.:|::    .:|         :|.:.:.    :|.....:::..
  Fly   338 DELQQVNVRTVHNLPGVGKNLHNHVT----YFT---------NFFIDDADTAPLNWATAMEYLLF 389

  Fly   392 SDSFFYAMPVSEVMGFFSTRYQDPRLDWPDVQIFMGSYGYGADGGMIGRRGAAITLDNYAEAFEP 456
            .|.......:|:|....:|||.|.. :.||:|::.|  ||.|.....|:.|.  .|.|.:.:.: 
  Fly   390 RDGLMSGTGISDVTAKLATRYADSP-ERPDLQLYFG--GYLASCARTGQVGE--LLSNNSRSIQ- 448

  Fly   457 VLYQDSFVIAPLLMRPRSRGYLQLRSADPKVHPLIHANYYDDPHDMAVMVEGLKLAHRLTQTPVM 521
                    |.|.::.|||||::.||||||...|.|.|||.....|:..:|||:|...||:||..:
  Fly   449 --------IFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPL 505

  Fly   522 QSLNATMNIYEWRNCPEVEYLSDAFWECLARFYSQTIYHPVGTCKMAPASDPAGVVDPRLRVRGM 586
            :.....::....:.|....:.|||:|||..|..:....|..|:|||.|:.||..||:..|||.|:
  Fly   506 KQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGI 570

  Fly   587 RGLRVIDASIMPTIPTGNTNAPTLMLAERGADIIKEDW 624
            |||||:|.||||.:.:|||:||.:|:||:||.::|..|
  Fly   571 RGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12398NP_572985.1 PRK02106 55..632 CDD:235000 231/580 (40%)
NADB_Rossmann 58..>93 CDD:304358 27/34 (79%)
NADB_Rossmann 129..354 CDD:304358 98/230 (43%)
GMC_oxred_C 472..615 CDD:282984 64/142 (45%)
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 30/68 (44%)
GMC_oxred_C 64..601 CDD:331873 227/570 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 1 1.100 - - P PTHR11552
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
98.960

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