DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9512 and chdh

DIOPT Version :10

Sequence 1:NP_572982.1 Gene:CG9512 / 32419 FlyBaseID:FBgn0030593 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_002663301.2 Gene:chdh / 100331020 ZFINID:ZDB-GENE-120111-1 Length:585 Species:Danio rerio


Alignment Length:624 Identity:215/624 - (34%)
Similarity:306/624 - (49%) Gaps:97/624 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LMSLLLSTLI-TKYCDLSGQNQWPEDKGDWLEQAGGFKHDYDFIVIGSGTSGAVVAGRLAEVKNW 82
            |||.|.|.|: .:|.........|               .|.::::|:|::|.|:|.||.|..:.
Zfish    10 LMSSLCSPLLHHRYISTVVNKNTP---------------SYSYVIVGAGSAGCVLASRLTENPSD 59

  Fly    83 KVLLLEAG-GDPPIETEFVAW--HMATQFS------EWDWQYHSKPNGRACMAMKGESCHWPRGK 138
            .||||||| .|..:.:..::|  ||....:      .::|.||:.|...    |.....:||||:
Zfish    60 SVLLLEAGPKDKHLGSTRLSWKIHMPAALTYNLCDDRYNWFYHTLPQAH----MDDRVMYWPRGR 120

  Fly   139 MLGGTNGMNAMIYARGTRKDFDDWEERGNPGWGYDEVLKHFRKAEDLRSTRPD-YKPGDHGVGGP 202
            :.||::.:|||:|.||..:|::.|:..|..||.||..|.:||||: .....|| |:.||    ||
Zfish   121 VWGGSSSLNAMVYIRGHAEDYNRWQSEGADGWNYDHCLPYFRKAQ-THELGPDRYRGGD----GP 180

  Fly   203 MGLNNYVSDNEFR-TTIRAGMQEMGYGSAPDFT----EGSFVGQMDILGTQDGGRRITTARSHLK 262
            :.::...:.|... ..|:|| |:.||....|..    ||  ||.||:  |...|:|.:||.::|:
Zfish   181 LHVSRGKTQNPLHYAFIQAG-QQAGYPYTEDMNGFQQEG--VGWMDM--TIHKGQRWSTASAYLR 240

  Fly   263 K--NTPNLHILRHAHVKKINLDRNNRAESVTFVHRG--KKEYTVKASKEVIVSAGAIGSPQILLL 323
            .  :.|||.......|.::..| ..||..|.:...|  ||   |.|.||||:|.|||.|||:|||
Zfish   241 PALSRPNLSTEVRCMVTRVLFD-GARARGVEYQQNGQIKK---VFAEKEVILSGGAINSPQLLLL 301

  Fly   324 SGIGPADHLKSLGIPVKLDLP-VGENLKDHASLPMIFQ------IDKSTARKPTEEELVDAMYNL 381
            ||:|.||.||:|.|||...|| ||.||:||  |.:..|      |....|:||.:...:...:.|
Zfish   302 SGVGNADELKTLDIPVVQHLPGVGCNLQDH--LELYVQHACTQPITLYRAQKPLQMLKIGLEWLL 364

  Fly   382 LMGRYSKLLHHEATALTGFINTTSIEGPNPDIQTTNFFSLMQSPELKGYVAATGFNDRVAKSILS 446
            ....|....|.|:   .|||.:.. :.|:||||    |..:.|..:.        :.||:..|.:
Zfish   365 KFTGYGATAHLES---GGFIRSRP-DVPHPDIQ----FHFLPSQVID--------HGRVSSKIEA 413

  Fly   447 ANQETNTYITYLLHLKPF---SAGSLTLQSANYLDAPIIDPGYMTDERDVDTYIRALNIYKNLPN 508
                      :.:|:.|.   |.|.|.|:|.:..|.||:.|.|::.|.||..:...:.:.:.:..
Zfish   414 ----------FQVHVGPMRSTSVGWLKLKSKDPRDHPILQPNYLSTETDVLEFRECVRLTREIFA 468

  Fly   509 TKAFSEREAALHKLDLEACNGLTYQSDDYWRCYIRHMTTTVYHPVGTTRMGPSTDPTAVVDPQLR 573
            .:||.|....      |...|...|||.....::|....:.|||..|.:||...|..|||.|:||
Zfish   469 QQAFDEFRGP------EVQPGPAVQSDAEIDAFVRQKADSAYHPSCTCKMGRPEDRMAVVSPELR 527

  Fly   574 VHGAKGLRVIDASIMPDIVGANTNAACIMIAEKGADMIK 612
            |.|.:||||:|||:||.:|..|.||..||||||.||.||
Zfish   528 VFGVEGLRVVDASVMPSMVSGNLNAPTIMIAEKAADAIK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9512NP_572982.1 BetA 57..618 CDD:441878 207/585 (35%)
chdhXP_002663301.2 PRK02106 30..585 CDD:235000 208/604 (34%)

Return to query results.
Submit another query.