DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9514 and HTH

DIOPT Version :9

Sequence 1:NP_572981.1 Gene:CG9514 / 32418 FlyBaseID:FBgn0030592 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_565050.1 Gene:HTH / 843628 AraportID:AT1G72970 Length:594 Species:Arabidopsis thaliana


Alignment Length:658 Identity:163/658 - (24%)
Similarity:253/658 - (38%) Gaps:182/658 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 YNYDLFD-------PENRPFNVQQVDLAYDFIIIGGGSAGTVLASRLSEIPHWKILLLEAGGHET 131
            |.|...|       ..:..|:....|.:||:|:||||:||..||:.||:  ::.:|:||.||...
plant    35 YRYTFIDKASTFSSSSSSSFSSNGQDSSYDYIVIGGGTAGCPLAATLSQ--NFSVLVLERGGVPF 97

  Fly   132 EISDVPLLSLYLHKSKMDWKYRTQPQPTACQAMKDKRCCW-TRGKVLGGSSVLNTMLYIRGNKRD 195
            ..::|..|..: |....|..     ..:|.||.......: .|.:||||.|.:|...|.|.:.  
plant    98 TNANVSFLRNF-HIGLADIS-----ASSASQAFVSTDGVYNARARVLGGGSCINAGFYSRADA-- 154

  Fly   196 FDQWADFGNPGWSYEDILPYFRKSEDQRNPYLARNKRYHGTGGLW--TVQDA-------PYNTPI 251
                |.....||.        .|...:..|::.|...:.....||  .::|:       |:|   
plant   155 ----AFVKRAGWD--------PKLVKESYPWVEREIVHQPKLTLWQKALRDSLLEVGVRPFN--- 204

  Fly   252 GPAFLQAGEEMGYDIVDVNGEQQTGFGFYQFNMRRGSRSSTAK--SFLRPARLRPNLHVALFSHV 314
                       |:....|:|.:..|..|.:|    |.|.:.|:  ::..|.:||    |.:::.|
plant   205 -----------GFTYDHVSGTKIGGTIFDRF----GRRHTAAELLAYANPQKLR----VLIYATV 250

  Fly   315 TKVLTDPH--TKRATGVQF--IRDGRLQNVYATR---EVILSAGAIGSPHLMMLSGIGHGEELGR 372
            .|::.|..  ..|.|||.|  .:..:.|.:.:.|   |||||:||||||.::||||||..:||.|
plant   251 QKIVFDTSGTRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGPKKELQR 315

  Fly   373 VGIPLVQHLPGVGQNLQDHIAVGGIAFLIDYPISIVMKRMVNINTALRYAITEDGPLTSSIGLEA 437
            :.||:|.....||:.:.|:                      .:||.|   :....|:..|: ::.
plant   316 LKIPVVLENEHVGKGMADN----------------------PMNTIL---VPSKAPIEQSL-IQT 354

  Fly   438 VAFINTK---YANASDDWPDMNFMMTSASVMSDGGSQVKTAHGLTDEFYQEVFGEVNNR-DVFGV 498
            |..  ||   |..||                        |..|.:.|.....:|.::|: ::|..
plant   355 VGI--TKMGVYVEAS------------------------TGFGQSPESIHTHYGIMSNKNELFST 393

  Fly   499 FPMMLR-------------------------------PKSRGYIKLASKNPLRYPLLYHNYLTHP 532
            .|...|                               |.|||::.|.:.|....|.:..||..||
plant   394 IPAKQRRPEATQAYITRNKYQLHEAFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHP 458

  Fly   533 DDVNVLREGVKAAVAMGETQAMKRFGARYWNKPVPNC-KHLTLYTDDYWNC-------------F 583
            .|   |:..|:|...:.:.....|| ..|......|. |.|:|......|.             |
plant   459 VD---LQRCVEAIRLVSKVVTSNRF-LNYTQCDKQNVHKMLSLSVKANINLRPKQLNDTKSMAQF 519

  Fly   584 IRQYTMTIYHMSGTAKMGPPTDPWAVVDPQLRVYGIPGLRVIDASIMPAITNGNIHAPVVMIGE- 647
            .:...:||:|..|...:|      .||.|..:|.|:..|||||.|........|..|.::|:|. 
plant   520 CKDTVVTIWHYHGGCLVG------KVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGRY 578

  Fly   648 KGADMIKQ 655
            .|..::::
plant   579 MGVKILRE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9514NP_572981.1 PRK02106 95..679 CDD:235000 158/630 (25%)
NADB_Rossmann 96..>126 CDD:304358 14/29 (48%)
NADB_Rossmann 167..391 CDD:304358 68/242 (28%)
GMC_oxred_C 505..648 CDD:282984 44/157 (28%)
HTHNP_565050.1 PLN02785 18..594 CDD:215420 163/658 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

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