DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9514 and Chdh

DIOPT Version :9

Sequence 1:NP_572981.1 Gene:CG9514 / 32418 FlyBaseID:FBgn0030592 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_942026.1 Gene:Chdh / 290551 RGDID:735166 Length:599 Species:Rattus norvegicus


Alignment Length:608 Identity:232/608 - (38%)
Similarity:318/608 - (52%) Gaps:73/608 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YDFIIIGGGSAGTVLASRLSEIPHWKILLLEAGGHETEISDVPL---------LSLYLHKSKMDW 150
            |.||::|.||||.|||:||:|.|:.::||||||..:..:....|         |...|...|.:|
  Rat    46 YTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCDDKYNW 110

  Fly   151 KYRTQPQPTACQAMKDKRCCWTRGKVLGGSSVLNTMLYIRGNKRDFDQWADFGNPGWSYEDILPY 215
            .|.|:.||    .:..:...|.||:|.||||.||.|:||||:..|:::|...|..||.|...|||
  Rat   111 YYHTEAQP----GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLPY 171

  Fly   216 FRKSEDQRNPYLARNKRYHGTGGLWTVQDAPYNTPIGPAFLQAGEEMGYDIV-DVNGEQQTGFGF 279
            |||::...   |..| .|.|..|...|.....|.|:..|||||..:.||... |:||.||.|||:
  Rat   172 FRKAQKHE---LGAN-MYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGW 232

  Fly   280 YQFNMRRGSRSSTAKSFLRPARLRPNLHVALFSHVTKVLTDPHTKRATGVQFIRDGRLQNVYATR 344
            ....:.:|.|.|||.::||||..||||...:.:.|::||.:  ..||.||::|:||:....|.:|
  Rat   233 MDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--GTRAVGVEYIKDGQSHKAYVSR 295

  Fly   345 EVILSAGAIGSPHLMMLSGIGHGEELGRVGIPLVQHLPGVGQNLQDHIAVGGIAFLIDYPISI-- 407
            |||||.|||.||.|:||||:|:.::|.::|||:|.||||||||||||:.: .|......||::  
  Rat   296 EVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEI-YIQHACTQPITLHS 359

  Fly   408 VMK--RMVNINTALRYAITEDGPLTSSIGLEAVAFINTKYANASDDWPDMNFMMTSASVMSDGGS 470
            ..|  |.|.|.....:..|.||   ::..||...||.::   .....||:.|....:.|:..|..
  Rat   360 AQKPLRKVCIGLEWLWRFTGDG---ATAHLETGGFIRSR---PGVPHPDIQFHFLPSQVIDHGRK 418

  Fly   471 QVKTAHGLTDEFYQEVFGEVNNRDVFGVFPMMLRPKSRGYIKLASKNPLRYPLLYHNYLTHPDDV 535
            ..:      .|.||...|             .:|..|.|::||.|.||..:|::..|||:...||
  Rat   419 PTQ------QEAYQVHVG-------------TMRATSVGWLKLRSTNPQDHPMINPNYLSTETDV 464

  Fly   536 NVLREGVKAAVAMGETQAMKRFGARYWNKPVPNCKHLTLYTDDYWNCFIRQYTMTIYHMSGTAKM 600
            ...|:.||..   .|..|.:.| |.:..|.:....|  :.:|...:.|:|....:.||.|.|.||
  Rat   465 EDFRQCVKLT---REIFAQEAF-APFRGKELQPGSH--VQSDKEIDAFVRAKADSAYHPSCTCKM 523

  Fly   601 GPPTDPWAVVDPQLRVYGIPGLRVIDASIMPAITNGNIHAPVVMIGEKGADMIKQLWLTPTTAPV 665
            |.|:||.||||.|.||.|:..||||||||||::.:||::||.:||.||.||:||           
  Rat   524 GQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIK----------- 577

  Fly   666 GVQGQGPSPRQGHNTSPAPPPRT 688
                  ..|..|....|...|:|
  Rat   578 ------GCPALGDENVPVYKPQT 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9514NP_572981.1 PRK02106 95..679 CDD:235000 229/597 (38%)
NADB_Rossmann 96..>126 CDD:304358 17/29 (59%)
NADB_Rossmann 167..391 CDD:304358 106/224 (47%)
GMC_oxred_C 505..648 CDD:282984 59/142 (42%)
ChdhNP_942026.1 PRK02106 45..591 CDD:235000 230/603 (38%)
NADB_Rossmann 49..>151 CDD:304358 43/105 (41%)
GMC_oxred_N 121..344 CDD:279121 108/228 (47%)
GMC_oxred_C 435..572 CDD:282984 60/142 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 244 1.000 Domainoid score I2129
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I2269
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm44531
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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