DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9514 and chdh-1

DIOPT Version :9

Sequence 1:NP_572981.1 Gene:CG9514 / 32418 FlyBaseID:FBgn0030592 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_495846.1 Gene:chdh-1 / 174390 WormBaseID:WBGene00007917 Length:599 Species:Caenorhabditis elegans


Alignment Length:625 Identity:214/625 - (34%)
Similarity:321/625 - (51%) Gaps:105/625 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ENRPFNVQQVDLAYDFIIIGGGSAGTVLASRLSEIPHWKILLLEAG--GHETEIS-DVPLLSLY- 142
            ||:|.:          ||:|.||||.|||:||:|.|..::||:|||  .|:.:.. .:|...:| 
 Worm    35 ENKPTH----------IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYN 89

  Fly   143 LHKSKMDWKYRTQPQPTACQAMKDKRCCWTRGKVLGGSSVLNTMLYIRGNKRDFDQWADFGNPGW 207
            |.....:|.|.|    ||.:.:.::...|.||:|.||||.||.|.|:||:..|:::|...|..||
 Worm    90 LCSDTYNWHYHT----TAQKNLGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGW 150

  Fly   208 SYEDILPYFRKSE---DQRNPYLARNKRYHGTGGLWTVQDAPYNTPIGPAFLQAGEE--MGYDIV 267
            :|.:.||||:|:|   |...|    |..|.|..|...|:......|:..|:|..|:|  :|: ..
 Worm   151 NYANCLPYFKKAETYSDATGP----NDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGW-TN 210

  Fly   268 DVNGEQQTGFGFYQFNMRRGSRSSTAKSFLRPARLRPNLHVALFSHVTKVLTDPHTKRATGVQFI 332
            |:|||:|.|.......:..|.|.|.:|:::.|.|.||||..:.....|:||.|  |.:|.|::||
 Worm   211 DMNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRPNLITSSGITCTRVLFD--TNKAIGIEFI 273

  Fly   333 RDGRL-----------QNVYATREVILSAGAIGSPHLMMLSGIGHGEELGRVGIPLVQHLPGVGQ 386
            |....           :.:|...:|||:.|||.:|.|:||||:|..:.|....||:|.:||||||
 Worm   274 RKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANLPGVGQ 338

  Fly   387 NLQDHIAVGGIAFLIDY-------PISIVMK-------RMVNINTALRYAITEDGPLTSSIGLEA 437
            |||||:.:        |       |:::..|       .|:.|  .|.:       .|:..||.|
 Worm   339 NLQDHLEI--------YVQQESTQPVTLYNKSSWKFPHNMIKI--GLEW-------FTNRTGLGA 386

  Fly   438 VAFINTKYANASDD---WPDMNFMMTSASVMSDGGSQVKTAHGLTDEFYQEVFGEVNNRDVFGVF 499
            .:.:.|.....|||   .||:.|....::|..||.:. .|.||     ||...|           
 Worm   387 SSHLETGGFARSDDTVTHPDIQFHFLPSTVHDDGRTN-GTCHG-----YQVHVG----------- 434

  Fly   500 PMMLRPKSRGYIKLASKNPLRYPLLYHNYLTHPDDVNVLREGVKAAVAMGETQAMKRFGARYWNK 564
            ||  |.:|:|||.|.:|:|.|.|::..||:....|....|:.::.:..:..::|...|..:.. .
 Worm   435 PM--RSQSKGYIMLQAKDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKEL-A 496

  Fly   565 PVPNCKHLTLYTDDYWNCFIRQYTMTIYHMSGTAKMGPPTDPWAVVDPQ-LRVYGIPGLRVIDAS 628
            |.|:|:     :|...:.|:::...:.||.|.|.|||...|..|||:|: :.|||...|:|:|||
 Worm   497 PGPDCQ-----SDADIDRFVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTENLKVVDAS 556

  Fly   629 IMPAITNGNIHAPVVMIGEKGADMI---KQLWLTPTTAPV 665
            :||:|.:||::|||:|:.|:.||:|   ||| |.|:.|.|
 Worm   557 VMPSIVSGNLNAPVIMMAERAADLIKHKKQL-LPPSDANV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9514NP_572981.1 PRK02106 95..679 CDD:235000 211/612 (34%)
NADB_Rossmann 96..>126 CDD:304358 16/29 (55%)
NADB_Rossmann 167..391 CDD:304358 92/239 (38%)
GMC_oxred_C 505..648 CDD:282984 49/143 (34%)
chdh-1NP_495846.1 PRK02106 41..599 CDD:235000 211/609 (35%)
NADB_Rossmann 41..>78 CDD:304358 20/36 (56%)
NADB_Rossmann 108..345 CDD:304358 94/243 (39%)
GMC_oxred_C 439..577 CDD:282984 50/143 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I1583
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 310 1.000 Inparanoid score I1553
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm14159
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3702
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.810

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