DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9518 and HTH

DIOPT Version :9

Sequence 1:NP_001285249.1 Gene:CG9518 / 32416 FlyBaseID:FBgn0030590 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_565050.1 Gene:HTH / 843628 AraportID:AT1G72970 Length:594 Species:Arabidopsis thaliana


Alignment Length:657 Identity:162/657 - (24%)
Similarity:245/657 - (37%) Gaps:182/657 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YRYDAVD-------PESRPLDQLNLYPEYDFIVVGSGSAGAVVANRLSEVRKWKVLLIEAG--PD 91
            |||..:|       ..|...........||:||:|.|:||..:|..||:  .:.||::|.|  |.
plant    35 YRYTFIDKASTFSSSSSSSFSSNGQDSSYDYIVIGGGTAGCPLAATLSQ--NFSVLVLERGGVPF 97

  Fly    92 ENE-----------ISDVPSLAAYLQLSKLDWAYKTEPSTKACLGMQNNRCNWPRGRVLGGSSVL 145
            .|.           ::|:.:.:|.......|..|..                  |.|||||.|.:
plant    98 TNANVSFLRNFHIGLADISASSASQAFVSTDGVYNA------------------RARVLGGGSCI 144

  Fly   146 NYMLYVRGNRHDYDHWASLGNPGWDYDNVLRYFKKSEDNRNPYLANNKYHGRGGLLTVQESPW-- 208
            |...|.|.:.      |.:...|||                |.|....|            ||  
plant   145 NAGFYSRADA------AFVKRAGWD----------------PKLVKESY------------PWVE 175

  Fly   209 ----HSP--------LVAAFVEAGTQ----LGYDNRDINGAKQAGFMIAQGTI--RRGSRCSTAK 255
                |.|        |..:.:|.|.:    ..||:  ::|.|      ..|||  |.|.|.:.|:
plant   176 REIVHQPKLTLWQKALRDSLLEVGVRPFNGFTYDH--VSGTK------IGGTIFDRFGRRHTAAE 232

  Fly   256 --AFLRPIRMRKNFHLSMNSHVTRVIIEPGTMRAQAVEFV-------KHGKVYRIAARREVIISA 311
              |:..|.::|    :.:.:.|.:::.:....|.:....:       :|..:.......|||:|:
plant   233 LLAYANPQKLR----VLIYATVQKIVFDTSGTRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSS 293

  Fly   312 GAINTPQLMMLSGLGPRKHLEKHGIRVLQDLPVGENMQDHVGMGGL-----TFLVDKPVAIVQDR 371
            |||.:||::||||:||:|.|::..|.|     |.||  :|||.|..     |.||.....|.|..
plant   294 GAIGSPQMLMLSGIGPKKELQRLKIPV-----VLEN--EHVGKGMADNPMNTILVPSKAPIEQSL 351

  Fly   372 FNPTAVTFQYVLRERGPMTTLGGVEGLAFVHTPY---SNRSLDWPDIQFHMAPASINSDNGARVK 433
            .....:|...|..|    .:.|..:....:||.|   ||:     :..|...||........:..
plant   352 IQTVGITKMGVYVE----ASTGFGQSPESIHTHYGIMSNK-----NELFSTIPAKQRRPEATQAY 407

  Fly   434 KVLGLKESVYQEVYHPIANKDSWTIMPLLLRPRSRGSVKLRSANPFHYPLINANYFDDPLDAKTL 498
                :..:.||  .|...|..  .|:..|..|.|||.:.|.:.|....|.:..|||..|:|.:..
plant   408 ----ITRNKYQ--LHEAFNGS--FILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRC 464

  Fly   499 VEGAKIALRVAEAQVFKQFGSRLWRKPLPNC-KQ--HKFLS---DAYLECHVRTIS--------- 548
            ||..::..:|..:..|..:         ..| ||  ||.||   .|.:....:.::         
plant   465 VEAIRLVSKVVTSNRFLNY---------TQCDKQNVHKMLSLSVKANINLRPKQLNDTKSMAQFC 520

  Fly   549 ----MTIYHPCGTAKMGPAWDPEAVVDPRLRVYGVRGLRVIDASIMPTISSGNTNAPVIMIAE-K 608
                :||:|..|...:|      .||.|..:|.||..|||||.|........|..|.::|:.. .
plant   521 KDTVVTIWHYHGGCLVG------KVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGRYM 579

  Fly   609 GADLIKE 615
            |..:::|
plant   580 GVKILRE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9518NP_001285249.1 PRK02106 56..614 CDD:235000 156/627 (25%)
NADB_Rossmann 128..351 CDD:304358 63/251 (25%)
GMC_oxred_C 465..608 CDD:282984 44/162 (27%)
HTHNP_565050.1 PLN02785 18..594 CDD:215420 162/657 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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