DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9518 and Chdh

DIOPT Version :9

Sequence 1:NP_001285249.1 Gene:CG9518 / 32416 FlyBaseID:FBgn0030590 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_942026.1 Gene:Chdh / 290551 RGDID:735166 Length:599 Species:Rattus norvegicus


Alignment Length:573 Identity:227/573 - (39%)
Similarity:309/573 - (53%) Gaps:54/573 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EYDFIVVGSGSAGAVVANRLSEVRKWKVLLIEAGPDEN---------EISDVPSLAAYLQLSKLD 111
            ||.|||||:||||.|:||||:|....:|||:||||.:.         :|....:|.|.|...|.:
  Rat    45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCDDKYN 109

  Fly   112 WAYKTEPSTKACLGMQNNRCNWPRGRVLGGSSVLNYMLYVRGNRHDYDHWASLGNPGWDYDNVLR 176
            |.|.||    |..|:......||||||.||||.||.|:|:||:..||:.|...|..||||.:.|.
  Rat   110 WYYHTE----AQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLP 170

  Fly   177 YFKKSEDNRNPYLANNKYHGRGGLLTVQESPWHSPLVAAFVEAGTQLGYD-NRDINGAKQAGFMI 240
            ||:|::.:.   |..|.|.|..|.|.|.....:.||..||::|..|.||. ..|:||.:|.||..
  Rat   171 YFRKAQKHE---LGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGW 232

  Fly   241 AQGTIRRGSRCSTAKAFLRPIRMRKNFHLSMNSHVTRVIIEPGTMRAQAVEFVKHGKVYRIAARR 305
            ...||.:|.|.|||.|:|||...|.|....:.:.|:||:.| || ||..||::|.|:.::....|
  Rat   233 MDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE-GT-RAVGVEYIKDGQSHKAYVSR 295

  Fly   306 EVIISAGAINTPQLMMLSGLGPRKHLEKHGIRVLQDLP-VGENMQDHVGMGGLTFLVDKPVAI-- 367
            |||:|.||||:|||:||||:|....|:|.||.|:..|| ||:|:|||:.: .:.....:|:.:  
  Rat   296 EVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEI-YIQHACTQPITLHS 359

  Fly   368 VQDRFNPTAVTFQYVLRERGPMTTLGGVEGLAFVHTPYSNRSLDWPDIQFHMAPASINSDNGARV 432
            .|.......:..:::.|..|...| ..:|...|:.   |...:..||||||..|:.: .|:|   
  Rat   360 AQKPLRKVCIGLEWLWRFTGDGAT-AHLETGGFIR---SRPGVPHPDIQFHFLPSQV-IDHG--- 416

  Fly   433 KKVLGLKESVYQEVYHPIANKDSWTIMPLLLRPRSRGSVKLRSANPFHYPLINANYFDDPLDAKT 497
                  ::...||.|.         :....:|..|.|.:||||.||..:|:||.||.....|.:.
  Rat   417 ------RKPTQQEAYQ---------VHVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVED 466

  Fly   498 LVEGAKIALRVAEAQVFKQF-GSRLWRKPLPNCKQHKFLSDAYLECHVRTISMTIYHPCGTAKMG 561
            ..:..|:...:...:.|..| |..|  :|..:.:     ||..::..||..:.:.|||..|.|||
  Rat   467 FRQCVKLTREIFAQEAFAPFRGKEL--QPGSHVQ-----SDKEIDAFVRAKADSAYHPSCTCKMG 524

  Fly   562 PAWDPEAVVDPRLRVYGVRGLRVIDASIMPTISSGNTNAPVIMIAEKGADLIK 614
            ...||.||||.:.||.||..||||||||||::.|||.|||.||||||.||:||
  Rat   525 QPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9518NP_001285249.1 PRK02106 56..614 CDD:235000 225/571 (39%)
NADB_Rossmann 128..351 CDD:304358 102/224 (46%)
GMC_oxred_C 465..608 CDD:282984 61/143 (43%)
ChdhNP_942026.1 PRK02106 45..591 CDD:235000 227/573 (40%)
NADB_Rossmann 49..>151 CDD:304358 48/105 (46%)
GMC_oxred_N 121..344 CDD:279121 104/227 (46%)
GMC_oxred_C 435..572 CDD:282984 62/143 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 244 1.000 Domainoid score I2129
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I2269
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm44531
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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