DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9518 and chdh-1

DIOPT Version :9

Sequence 1:NP_001285249.1 Gene:CG9518 / 32416 FlyBaseID:FBgn0030590 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_495846.1 Gene:chdh-1 / 174390 WormBaseID:WBGene00007917 Length:599 Species:Caenorhabditis elegans


Alignment Length:590 Identity:216/590 - (36%)
Similarity:314/590 - (53%) Gaps:83/590 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IVVGSGSAGAVVANRLSEVRKWKVLLIEAGPDENEIS---DVPSLAAY-LQLSKLDWAYKTEPST 120
            |:||:||||.|:||||:|....:||||||||.:::..   .:|:...| |.....:|.|.|  :.
 Worm    41 IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYHT--TA 103

  Fly   121 KACLGMQNNRCNWPRGRVLGGSSVLNYMLYVRGNRHDYDHWASLGNPGWDYDNVLRYFKKSEDNR 185
            :..||  |....||||||.||||.||.|.||||:.:||:.|...|..||:|.|.|.||||:|...
 Worm   104 QKNLG--NRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCLPYFKKAETYS 166

  Fly   186 NPYLANNKYHGRGGLLTVQESPWHSPLVAAFVEAGTQ--LGYDNRDINGAKQAGFMIAQGTIRRG 248
            :....|:.|.|..|.|.|::....:||..|::..|.:  ||:.| |:||.||.|......||..|
 Worm   167 DATGPNDPYRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGWTN-DMNGEKQEGISTMDMTIHNG 230

  Fly   249 SRCSTAKAFLRPIRMRKNFHLSMNSHVTRVIIEPGTMRAQAVEFVK--------------HGKVY 299
            .|.|.:||::.|||.|.|...|.....|||:.:  |.:|..:||::              ..|:|
 Worm   231 ERWSASKAYVHPIRNRPNLITSSGITCTRVLFD--TNKAIGIEFIRKLNFVGTDSIDSYSREKIY 293

  Fly   300 RIAARREVIISAGAINTPQLMMLSGLGPRKHLEKHGIRVLQDLP-VGENMQDHVGMGGLTFLVD- 362
               .:.:||::.||||||||:||||:||..||..|.|.::.:|| ||:|:|||     |...|. 
 Worm   294 ---CQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANLPGVGQNLQDH-----LEIYVQQ 350

  Fly   363 ---KPVAIVQDRFNPTAVTFQYVLRERG-----PMTTLGGVEGLAFVHTPYSNRSLDWPDIQFHM 419
               :||.:    :|.::..|.:.:.:.|     ..|.||....|.......|:.::..||||||.
 Worm   351 ESTQPVTL----YNKSSWKFPHNMIKIGLEWFTNRTGLGASSHLETGGFARSDDTVTHPDIQFHF 411

  Fly   420 APASINSD---NGARVKKVLGLKESVYQEVYHPIANKDSWTIMPLLLRPRSRGSVKLRSANPFHY 481
            .|::::.|   ||..         ..||....|             :|.:|:|.:.|::.:|...
 Worm   412 LPSTVHDDGRTNGTC---------HGYQVHVGP-------------MRSQSKGYIMLQAKDPRRA 454

  Fly   482 PLINANYFDDPLDAKTLVEGAKIALRVAEAQVFKQF-GSRLWRKPLPNCKQHKFLSDAYLECHVR 545
            |:||.||.::..|.:...:..:::..:..::.|.:| |..|  .|.|:|:     |||.::..|:
 Worm   455 PIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKEL--APGPDCQ-----SDADIDRFVK 512

  Fly   546 TISMTIYHPCGTAKMGPAWDPEAVVDPR-LRVYGVRGLRVIDASIMPTISSGNTNAPVIMIAEKG 609
            ..:.:.|||..|.|||...|..|||:|. :.|||...|:|:|||:||:|.|||.||||||:||:.
 Worm   513 EKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTENLKVVDASVMPSIVSGNLNAPVIMMAERA 577

  Fly   610 ADLIK 614
            |||||
 Worm   578 ADLIK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9518NP_001285249.1 PRK02106 56..614 CDD:235000 214/588 (36%)
NADB_Rossmann 128..351 CDD:304358 99/239 (41%)
GMC_oxred_C 465..608 CDD:282984 54/144 (38%)
chdh-1NP_495846.1 PRK02106 41..599 CDD:235000 216/590 (37%)
NADB_Rossmann 41..>78 CDD:304358 21/36 (58%)
NADB_Rossmann 108..345 CDD:304358 102/249 (41%)
GMC_oxred_C 439..577 CDD:282984 55/144 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I1583
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 310 1.000 Inparanoid score I1553
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm14159
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.870

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