DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9519 and Chdh

DIOPT Version :9

Sequence 1:NP_572978.1 Gene:CG9519 / 32415 FlyBaseID:FBgn0030589 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001129712.1 Gene:Chdh / 218865 MGIID:1860776 Length:596 Species:Mus musculus


Alignment Length:618 Identity:217/618 - (35%)
Similarity:303/618 - (49%) Gaps:134/618 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KYDFIVVGAGTAGCALAARLSENPRWRVLLLEAGGPENYAM---------DIP--IVAHLLQLGE 114
            :|.|:|||||:|||.||:||:|:|..||||||| ||::..|         .:|  :|::|.. .:
Mouse    42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEA-GPKDLLMGSKRLQWKIHMPAALVSNLCD-DK 104

  Fly   115 INWKYKTEPSNSYCLAMNNNRCNWPRGKVMGGSSVLNYMMYTRGNRRDYDRWARLGNPGWSYEEV 179
            .||.|.|||..    .|::....||||:|.||||.||.|:|.||:..||:||.|.|..||.|...
Mouse   105 YNWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHC 165

  Fly   180 LPYFKKYEGSVVPDADENLVGRN------GPVKVSYSETRTRIADAFVGATQDAGLP-RGDYNGD 237
            ||||:|        |..:.:|.|      ||:.||..:|...:..||:.|.:.||.| ..|.||.
Mouse   166 LPYFRK--------AQRHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGF 222

  Fly   238 KQIRVSYLQANIYNETRWSSNRAYLYPIKGKRRNLHVKKNALVTKILIDPQTKSAFGIIVKMDGK 302
            :|....::...::...|||:..|||:|:. .|.||..:...||:::|.  :...|.|:....||:
Mouse   223 QQEGFGWMDMTVHQGKRWSTACAYLHPVL-SRPNLRAEVQTLVSRVLF--EGTRAVGVEYIKDGQ 284

  Fly   303 MQKILARKEVILSAGAINTPQLLMLSGVGPAKHLREMGIKPLADL-AVGYNLQDHIAPAISFLCN 366
            ..|....:|||||.||||:||||||||||.|..||::.|..:..| .||.|||||:...:...|.
Mouse   285 RHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACT 349

  Fly   367 VS-SLQTSE--------------MFRSEAMSDFLKGRGVLRIPGGV--EAISFY-----ALDDAR 409
            .. :|.:::              .:..:..:..|:..|.:|...||  ..|.|:     .:|..|
Mouse   350 QPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGR 414

  Fly   410 NPDAWADMELFVVGGGLQTNLALRLALGIQSNIYETMFGELERQSANGFLIFPMILRAKSRGRIK 474
            .|                          .|...|:...|               .:||.|.|.:|
Mouse   415 KP--------------------------TQQEAYQVHVG---------------TMRATSVGWLK 438

  Fly   475 LKSRNPEEHPRIYANYFANPYDMNITVRGIEQAVSL-LDMPAFKAI----------GAHL-LEKR 527
            |:|.||.:||.|:.||.:...|    |....|.|.| .::.|.:|:          |:|: .:|.
Mouse   439 LRSANPRDHPVIHPNYLSTETD----VEDFRQCVRLSREIFAQEALAPFRGKELQPGSHVQSDKE 499

  Fly   528 IPNCAKYKWKSSAYWACYARHFTFTIYHYSGTAKMGPRSDPSAVVDARLRVHGIDKLRVVDASIM 592
            |....:.|..|:              ||.|.|.|||..|||:|||||:.:|.|::.|||||||||
Mouse   500 IDAFVRAKADSA--------------YHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIM 550

  Fly   593 PYLISGHPNGPVYLIAEKAADMIK-----EDHN 620
            |.::||:.|.|..:|||||||:||     ||.|
Mouse   551 PSVVSGNLNAPTVMIAEKAADIIKGHPALEDKN 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9519NP_572978.1 PRK02106 59..616 CDD:235000 212/607 (35%)
NADB_Rossmann 63..>99 CDD:304358 24/35 (69%)
NADB_Rossmann 132..356 CDD:304358 94/231 (41%)
GMC_oxred_C 468..611 CDD:282984 59/154 (38%)
ChdhNP_001129712.1 PRK02106 42..588 CDD:235000 217/618 (35%)
NAD_binding_8 47..>76 CDD:290186 21/29 (72%)
GMC_oxred_N 118..341 CDD:279121 96/233 (41%)
GMC_oxred_C 432..569 CDD:282984 59/154 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 241 1.000 Domainoid score I2232
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 336 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm42468
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

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