DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9519 and chdh

DIOPT Version :9

Sequence 1:NP_572978.1 Gene:CG9519 / 32415 FlyBaseID:FBgn0030589 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_002663301.2 Gene:chdh / 100331020 ZFINID:ZDB-GENE-120111-1 Length:585 Species:Danio rerio


Alignment Length:580 Identity:207/580 - (35%)
Similarity:293/580 - (50%) Gaps:67/580 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TTKYDFIVVGAGTAGCALAARLSENPRWRVLLLEAG------GPENYAMDIPIVAHL---LQLGE 114
            |..|.:::||||:|||.||:||:|||...|||||||      |....:..|.:.|.|   |....
Zfish    32 TPSYSYVIVGAGSAGCVLASRLTENPSDSVLLLEAGPKDKHLGSTRLSWKIHMPAALTYNLCDDR 96

  Fly   115 INWKYKTEPSNSYCLAMNNNRCNWPRGKVMGGSSVLNYMMYTRGNRRDYDRWARLGNPGWSYEEV 179
            .||.|.|.|.    ..|::....||||:|.||||.||.|:|.||:..||:||...|..||:|:..
Zfish    97 YNWFYHTLPQ----AHMDDRVMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQSEGADGWNYDHC 157

  Fly   180 LPYFKKYE-GSVVPDADENLVGRNGPVKVSYSETRTRIADAFVGATQDAGLP-RGDYNGDKQIRV 242
            ||||:|.: ..:.||   ...|.:||:.||..:|:..:..||:.|.|.||.| ..|.||.:|..|
Zfish   158 LPYFRKAQTHELGPD---RYRGGDGPLHVSRGKTQNPLHYAFIQAGQQAGYPYTEDMNGFQQEGV 219

  Fly   243 SYLQANIYNETRWSSNRAYLYPIKGKRRNLHVKKNALVTKILIDPQTKSAFGIIVKMDGKMQKIL 307
            .::...|:...|||:..|||.|.. .|.||..:...:||::|.|  ...|.|:..:.:|:::|:.
Zfish   220 GWMDMTIHKGQRWSTASAYLRPAL-SRPNLSTEVRCMVTRVLFD--GARARGVEYQQNGQIKKVF 281

  Fly   308 ARKEVILSAGAINTPQLLMLSGVGPAKHLREMGIKPLADL-AVGYNLQDHIAPAISFLCNVSSLQ 371
            |.||||||.||||:||||:|||||.|..|:.:.|..:..| .||.|||||:...:...|.    |
Zfish   282 AEKEVILSGGAINSPQLLLLSGVGNADELKTLDIPVVQHLPGVGCNLQDHLELYVQHACT----Q 342

  Fly   372 TSEMFRSEAMSDFLK-G-RGVLRIPG-----GVEAISFY-ALDDARNPDAWADMELFVVGGGLQT 428
            ...::|::.....|| | ..:|:..|     .:|:..|. :..|..:||                
Zfish   343 PITLYRAQKPLQMLKIGLEWLLKFTGYGATAHLESGGFIRSRPDVPHPD---------------- 391

  Fly   429 NLALRLALGIQSNIYETMFGELERQSA--NGFLIFPMILRAKSRGRIKLKSRNPEEHPRIYANYF 491
                     ||.:...:...:..|.|:  ..|.:....:|:.|.|.:||||::|.:||.:..||.
Zfish   392 ---------IQFHFLPSQVIDHGRVSSKIEAFQVHVGPMRSTSVGWLKLKSKDPRDHPILQPNYL 447

  Fly   492 ANPYDMNITVRGIEQAVSLLDMPAFKAIGAHLLEKRIPNCAKYKWKSSAYWACYARHFTFTIYHY 556
            :...|:......:.....:....||.......::   |..|.   :|.|....:.|....:.||.
Zfish   448 STETDVLEFRECVRLTREIFAQQAFDEFRGPEVQ---PGPAV---QSDAEIDAFVRQKADSAYHP 506

  Fly   557 SGTAKMGPRSDPSAVVDARLRVHGIDKLRVVDASIMPYLISGHPNGPVYLIAEKAADMIK 616
            |.|.|||...|..|||...|||.|::.|||||||:||.::||:.|.|..:|||||||.||
Zfish   507 SCTCKMGRPEDRMAVVSPELRVFGVEGLRVVDASVMPSMVSGNLNAPTIMIAEKAADAIK 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9519NP_572978.1 PRK02106 59..616 CDD:235000 205/578 (35%)
NADB_Rossmann 63..>99 CDD:304358 22/41 (54%)
NADB_Rossmann 132..356 CDD:304358 96/226 (42%)
GMC_oxred_C 468..611 CDD:282984 50/142 (35%)
chdhXP_002663301.2 PRK02106 30..585 CDD:235000 207/580 (36%)
NADB_Rossmann 38..>69 CDD:304358 21/30 (70%)
GMC_oxred_N 110..333 CDD:279121 98/228 (43%)
GMC_oxred_C 424..561 CDD:282984 50/142 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 241 1.000 Domainoid score I2198
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I2314
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.880

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