DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9521 and Chdh

DIOPT Version :9

Sequence 1:NP_572977.1 Gene:CG9521 / 32414 FlyBaseID:FBgn0030588 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_942026.1 Gene:Chdh / 290551 RGDID:735166 Length:599 Species:Rattus norvegicus


Alignment Length:608 Identity:205/608 - (33%)
Similarity:286/608 - (47%) Gaps:127/608 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EYDFIVVGAGTAGCALAARLSENPQWRVLLLEAG------GPERLV----MDVPIVAHFLQLGEM 113
            ||.|||||||:|||.||.||:|:|..||||||||      |.:||.    |...:||:... .:.
  Rat    45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCD-DKY 108

  Fly   114 NWKYRT--QPSDHACLAMNNNRCNWPRGKVMGGSSVLNYMMYTRGNRRDYDRWEALGNPGWSFKD 176
            ||.|.|  ||      .::.....||||:|.||||.||.|:|.||:..||:||...|..||.:..
  Rat   109 NWYYHTEAQP------GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAH 167

  Fly   177 VLPYFKKYE----GSSVPDAEEDYVGRNGPVKVSYVNWRSKIAEAFVDAAQQDGLKY-RDYNGRI 236
            .||||:|.:    |:::      |.|.:||:.||.......:.:||:.||:|.|..: .|.||..
  Rat   168 CLPYFRKAQKHELGANM------YRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQ 226

  Fly   237 QNGVAFLHTTTRNSTRWSSNRAYLYPLKGKRSNLHVRKNALVTKVLIDPQTKTAYGIMVQTEGRM 301
            |.|..::..|.....|||:..|||.|.. .|.||......||::||.  :...|.|:....:|:.
  Rat   227 QEGFGWMDMTIHQGKRWSTASAYLRPAL-SRPNLRAEVQTLVSRVLF--EGTRAVGVEYIKDGQS 288

  Fly   302 QKILARKEVIVSAGAINTPQLLMLSGVGPAKHLREVGIKPLADL-AVGYNLQDH---------TA 356
            .|....:|||:|.||||:||||||||||.|..|:::||..:..| .||.|||||         |.
  Rat   289 HKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQ 353

  Fly   357 PAVTFTTNATSLKFEDFSDPTLINRFNRMEGPYGSPGGCEAIAF-WDLDHERDEDGWPDIELFLV 420
            |....:......|.                        |..:.: |..   ..:.....:|   .
  Rat   354 PITLHSAQKPLRKV------------------------CIGLEWLWRF---TGDGATAHLE---T 388

  Fly   421 GGSMSSNPAISRAFGLKKSIYDTLFAEIEDKSLN---------AFMIFPMILRPKSRGRIMLKSS 476
            ||.:.|.|.:...        |..|..:..:.::         |:.:....:|..|.|.:.|:|:
  Rat   389 GGFIRSRPGVPHP--------DIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRST 445

  Fly   477 DPFKYPLIHANYFAHPYDVDISVRGLLKAISLMEQ----------RGME-----KINARLWEKKI 526
            :|..:|:|:.||.:...||:    ...:.:.|..:          ||.|     .:.:   :|:|
  Rat   446 NPQDHPMINPNYLSTETDVE----DFRQCVKLTREIFAQEAFAPFRGKELQPGSHVQS---DKEI 503

  Fly   527 PTCKQHPYKSWAYWACYVRHFTFTIYHYSGTAKMGPKSDRAAVVDHRLRVHGIKNLRVADASIMP 591
            .              .:||....:.||.|.|.|||..||..||||.:.||.|::||||.||||||
  Rat   504 D--------------AFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMP 554

  Fly   592 EIMSGHPNGPVFMIAEKAADMIK 614
            .::||:.|.|..||||||||:||
  Rat   555 SVVSGNLNAPTIMIAEKAADVIK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9521NP_572977.1 PRK02106 57..614 CDD:235000 203/606 (33%)
NADB_Rossmann 61..>92 CDD:304358 22/30 (73%)
NADB_Rossmann 125..356 CDD:304358 94/245 (38%)
GMC_oxred_C 465..609 CDD:282984 53/158 (34%)
ChdhNP_942026.1 PRK02106 45..591 CDD:235000 205/608 (34%)
NADB_Rossmann 49..>151 CDD:304358 50/108 (46%)
GMC_oxred_N 121..344 CDD:279121 94/231 (41%)
GMC_oxred_C 435..572 CDD:282984 53/157 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 244 1.000 Domainoid score I2129
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I2269
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm44531
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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