DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9521 and Chdh

DIOPT Version :9

Sequence 1:NP_572977.1 Gene:CG9521 / 32414 FlyBaseID:FBgn0030588 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001129712.1 Gene:Chdh / 218865 MGIID:1860776 Length:596 Species:Mus musculus


Alignment Length:603 Identity:205/603 - (33%)
Similarity:291/603 - (48%) Gaps:117/603 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EYDFIVVGAGTAGCALAARLSENPQWRVLLLEAG------GPERLV----MDVPIVAHFLQLGEM 113
            ||.|:|||||:|||.||:||:|:|..||||||||      |.:||.    |...:|::... .:.
Mouse    42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLCD-DKY 105

  Fly   114 NWKYRTQPSDHACLAMNNNRCNWPRGKVMGGSSVLNYMMYTRGNRRDYDRWEALGNPGWSFKDVL 178
            ||.|.|:|..    .|::....||||:|.||||.||.|:|.||:..||:||...|..||.:...|
Mouse   106 NWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHCL 166

  Fly   179 PYFKKYE----GSSVPDAEEDYVGRNGPVKVSYVNWRSKIAEAFVDAAQQDGLKY-RDYNGRIQN 238
            |||:|.:    |:::      |.|.:||:.||.......:.:||:.||:|.|..: .|.||..|.
Mouse   167 PYFRKAQRHELGANM------YRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQE 225

  Fly   239 GVAFLHTTTRNSTRWSSNRAYLYPLKGKRSNLHVRKNALVTKVLIDPQTKTAYGIMVQTEGRMQK 303
            |..::..|.....|||:..|||:|:. .|.||......||::||.  :...|.|:....:|:..|
Mouse   226 GFGWMDMTVHQGKRWSTACAYLHPVL-SRPNLRAEVQTLVSRVLF--EGTRAVGVEYIKDGQRHK 287

  Fly   304 ILARKEVIVSAGAINTPQLLMLSGVGPAKHLREVGIKPLADL-AVGYNLQDH---------TAPA 358
            ....:|||:|.||||:||||||||||.|..||::.|..:..| .||.|||||         |.|.
Mouse   288 AYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACTQPI 352

  Fly   359 VTFTTNATSLKFEDFSDPTLINRFNRMEGPYGSPGGCEAIAF-WDLDHERDEDGWPDIELFLVGG 422
            ...:......|.                        |..:.: |..   ..:.....:|   .||
Mouse   353 TLHSAQKPLRKV------------------------CIGLEWLWSY---TGDGATAHLE---TGG 387

  Fly   423 SMSSNPAISRAFGLKKSIYDTLFAEIEDKSLN---------AFMIFPMILRPKSRGRIMLKSSDP 478
            .:.|.|.:...        |..|..:..:.::         |:.:....:|..|.|.:.|:|::|
Mouse   388 FIRSRPGVPHP--------DIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSANP 444

  Fly   479 FKYPLIHANYFAHPYDVD-------ISVRGLLKAISLMEQRGME-----KINARLWEKKIPTCKQ 531
            ..:|:||.||.:...||:       :| |.:....:|...||.|     .:.:   :|:|.    
Mouse   445 RDHPVIHPNYLSTETDVEDFRQCVRLS-REIFAQEALAPFRGKELQPGSHVQS---DKEID---- 501

  Fly   532 HPYKSWAYWACYVRHFTFTIYHYSGTAKMGPKSDRAAVVDHRLRVHGIKNLRVADASIMPEIMSG 596
                      .:||....:.||.|.|.|||..||..||||.:.:|.|::||||.||||||.::||
Mouse   502 ----------AFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPSVVSG 556

  Fly   597 HPNGPVFMIAEKAADMIK 614
            :.|.|..||||||||:||
Mouse   557 NLNAPTVMIAEKAADIIK 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9521NP_572977.1 PRK02106 57..614 CDD:235000 203/601 (34%)
NADB_Rossmann 61..>92 CDD:304358 21/30 (70%)
NADB_Rossmann 125..356 CDD:304358 95/245 (39%)
GMC_oxred_C 465..609 CDD:282984 55/155 (35%)
ChdhNP_001129712.1 PRK02106 42..588 CDD:235000 205/603 (34%)
NAD_binding_8 47..>76 CDD:290186 21/28 (75%)
GMC_oxred_N 118..341 CDD:279121 94/231 (41%)
GMC_oxred_C 432..569 CDD:282984 55/154 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 241 1.000 Domainoid score I2232
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 336 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm42468
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

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