DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9522 and HTH

DIOPT Version :9

Sequence 1:NP_644677.1 Gene:CG9522 / 32413 FlyBaseID:FBgn0030587 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_565050.1 Gene:HTH / 843628 AraportID:AT1G72970 Length:594 Species:Arabidopsis thaliana


Alignment Length:623 Identity:158/623 - (25%)
Similarity:248/623 - (39%) Gaps:160/623 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FFSDVPQRNYDFIIVGGGAAGCTLAARLSENPNWSVFLIEAGGVENIVHQVPLL------AAHLQ 100
            |.|:....:||:|::|||.|||.|||.||:  |:||.::|.|||......|..|      .|.:.
plant    54 FSSNGQDSSYDYIVIGGGTAGCPLAATLSQ--NFSVLVLERGGVPFTNANVSFLRNFHIGLADIS 116

  Fly   101 STASNWGYNSTPQRHACRGMPDNKCALPRGKVLGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSY 165
            :::::..:.||...:..           |.:||||.|.||...|:|.     || |.....||. 
plant   117 ASSASQAFVSTDGVYNA-----------RARVLGGGSCINAGFYSRA-----DA-AFVKRAGWD- 163

  Fly   166 DEVLPYFLRSEHAQLQ-GLEHSPYHNHSGPLSVEDVRHRTRLAHAYIRAAQEAGHPRTDYNGESQ 229
                |..::..:..:: .:.|.|      .|::.....|..|....:|          .:||   
plant   164 ----PKLVKESYPWVEREIVHQP------KLTLWQKALRDSLLEVGVR----------PFNG--- 205

  Fly   230 LGVSYVQATTLK-------GRRHSA--FRAYIEPIRSRRHNLHILTLARVTRVLIDAATKSAYGV 285
            ....:|..|.:.       ||||:|  ..||..|     ..|.:|..|.|.:::.|.:     |.
plant   206 FTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANP-----QKLRVLIYATVQKIVFDTS-----GT 260

  Fly   286 ELTHQGRSFK----------VKARK--EIILSAGAFNSPQLLMLSGIGPEDNLKAIGIPLI-KAL 337
            .....|..||          :..||  |:|||:||..|||:||||||||:..|:.:.||:: :..
plant   261 RPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPVVLENE 325

  Fly   338 PVGKRMFDHMCHFGPTFVTNTTGQTLFAAQLGAPVAKEFLLGRADTFLSSIGGVETLTFIKVPS- 401
            .|||.|.|           |.....|..::  ||:.:        :.:.::|..:...:::..: 
plant   326 HVGKGMAD-----------NPMNTILVPSK--APIEQ--------SLIQTVGITKMGVYVEASTG 369

  Fly   402 -GKSPATQPDVELIQVAGSLASDD----GTALAKGANFKPE-----IYEKMYKNLTLRQQDHFSF 456
             |:||      |.|.....:.|:.    .|..||  ..:||     |....|:   |.:..:.||
plant   370 FGQSP------ESIHTHYGIMSNKNELFSTIPAK--QRRPEATQAYITRNKYQ---LHEAFNGSF 423

  Fly   457 LIMHFK-PASVGRLWLHNRNPLEWPRIDPKYFSAPSDVENLLEGIK-----------------EA 503
            ::.... |.|.|.|.|.|.|..:.|.:...||..|.|::..:|.|:                 :.
plant   424 ILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDK 488

  Fly   504 LRISKMPAMQA-IGTRLLDKPVPGCENY-EFASDDYWRCSIRTLSYTLHHQVATCRMGAESDPTT 566
            ..:.||.::.. ....|..|.:...::. :|..|..         .|:.|....|.:|      .
plant   489 QNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTV---------VTIWHYHGGCLVG------K 538

  Fly   567 VVNHQLKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIG 604
            ||:...||.||.:|||:|.|.....|..:..|...|:|
plant   539 VVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMG 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9522NP_644677.1 PRK02106 48..612 CDD:235000 156/617 (25%)
NADB_Rossmann 52..>83 CDD:304358 17/30 (57%)
NADB_Rossmann 127..348 CDD:304358 70/243 (29%)
GMC_oxred_C 463..607 CDD:282984 39/161 (24%)
HTHNP_565050.1 PLN02785 18..594 CDD:215420 158/623 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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