DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9522 and AT1G12570

DIOPT Version :9

Sequence 1:NP_644677.1 Gene:CG9522 / 32413 FlyBaseID:FBgn0030587 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_172718.2 Gene:AT1G12570 / 837814 AraportID:AT1G12570 Length:572 Species:Arabidopsis thaliana


Alignment Length:638 Identity:160/638 - (25%)
Similarity:247/638 - (38%) Gaps:133/638 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LFLLLIPLIHSQRSSQLDELRRLGLGNVVNVPFFSDV---PQRN-YDFIIVGGGAAGCTLAARLS 70
            ||:.|...:||...|.         ....|..|..|.   |..: ||:||:|||.|||.|||.||
plant    10 LFVALSLFLHSPICSS---------DKAPNYSFMRDATGSPTTSYYDYIIIGGGTAGCPLAATLS 65

  Fly    71 ENPNWSVFLIEAGGVENIVHQVPLLAAHLQSTASNWGYNSTPQRHACRGMPDNKCALPRGKVLGG 135
            :|.  ||.|:|.|........:..|:| ..:..|:...:|..||.    :.::.....|.:||||
plant    66 QNA--SVLLLERGDSPYNNPNITRLSA-FGAALSDLSESSPSQRF----VSEDGVINARARVLGG 123

  Fly   136 TSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLEHSPYHNHSGPLSVEDV 200
            .|::|...|.|...:      ...|.||.                ..|.:..|......::.:..
plant   124 GSALNAGFYTRAGTK------YVRNMGWD----------------GALANESYQWVEAKVAFQPP 166

  Fly   201 --RHRTRLAHAYIRA--AQEAGHPRTDYNGESQLGVSYVQATTLKGRRHSA--FRAYIEPIRSRR 259
              |.:|.:....:.|  ....|......||....|..:.:    .|.||:|  ...|.:|     
plant   167 MGRWQTAVRDGLLEAGIVPNNGFTYDHINGTKFGGTIFDR----NGNRHTAADLLEYADP----- 222

  Fly   260 HNLHILTLARVTRVLI--DAATKS-AYGV---ELTHQGRSFKVK--ARKEIILSAGAFNSPQLLM 316
            ..:.:|..|.|.|:|.  ...||. |.||   :.|.|.....:|  |..|||||||...||||||
plant   223 KGITVLLHATVHRILFRTRGTTKPIANGVVYRDRTGQAHRAYLKEGALSEIILSAGTLGSPQLLM 287

  Fly   317 LSGIGPEDNLKAIGIPLIKALP-VGKRMFDHMCHFGPTFVTNTTGQTLFAAQLGAPVAKEFLLGR 380
            |||:||...|:|..|.::...| ||:.|:|:               .:.|..:.:||..|..|  
plant   288 LSGVGPSAQLQAQNITVVMDQPHVGQGMYDN---------------PMNAVFVPSPVPVEVSL-- 335

  Fly   381 ADTFLSSIGGVETLTFIKVPSGKSPATQPDVELIQVAGSLASDDGTALAKG--ANFKPE---IYE 440
                :..:|.....|:::...|::           ..|......|::..:.  |.|.|.   :..
plant   336 ----IEVVGITGEGTYVEAAGGEN-----------FGGGGGGSSGSSSTRDYYAMFSPRATLLES 385

  Fly   441 KMYKNLTLRQQDHFSFLIMH-FKPASVGRLWLHNRNPLEWPRIDPKYFSAPSDVENLLEGIKEAL 504
            .....|:..|.....||:.. ..|.|.|.|.|..|||.:.|.:...||..|.|::..:.||:...
plant   386 NSMTKLSSAQPFQGGFLLEKVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIE 450

  Fly   505 RISKMPA----------MQAIGTRLLDKPV--------PGCENYEFASDDYWRCSIRTLSYTLHH 551
            |:.:..|          .:.:.......||        ||. :...:::::.:.::.    |:.|
plant   451 RVVQSKAFSRYKYADVSFEYLLNLTASTPVNLRPPRSGPGA-SLPPSAEEFCQHTVT----TIWH 510

  Fly   552 QVATCRMGAESDPTTVVNHQLKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIG 604
            ....|.:|      .||:...||.|:.:|||:|.|.:.:.|..:..|...|:|
plant   511 YHGGCVVG------RVVDGDYKVIGIDRLRVIDMSTVGYCPGTNPQATVMMLG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9522NP_644677.1 PRK02106 48..612 CDD:235000 150/597 (25%)
NADB_Rossmann 52..>83 CDD:304358 19/30 (63%)
NADB_Rossmann 127..348 CDD:304358 67/235 (29%)
GMC_oxred_C 463..607 CDD:282984 39/160 (24%)
AT1G12570NP_172718.2 PLN02785 10..572 CDD:215420 160/638 (25%)
NADB_Rossmann 46..301 CDD:304358 88/292 (30%)
NADB_Rossmann 47..>100 CDD:304358 23/55 (42%)
GMC_oxred_C 409..557 CDD:282984 38/158 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

Return to query results.
Submit another query.