DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9522 and chdh-1

DIOPT Version :9

Sequence 1:NP_644677.1 Gene:CG9522 / 32413 FlyBaseID:FBgn0030587 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_495846.1 Gene:chdh-1 / 174390 WormBaseID:WBGene00007917 Length:599 Species:Caenorhabditis elegans


Alignment Length:654 Identity:194/654 - (29%)
Similarity:301/654 - (46%) Gaps:136/654 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HSQRSSQLDELRRLGLGNVVNVPFFS-DVPQRNYDFIIVGGGAAGCTLAARLSENPNWSVFLIEA 82
            |:.||.|....|.:...:.:....|| |:.:.....||||.|:|||.||.||:|:|:..|.||||
 Worm     5 HAARSLQRTSKRWINWRDSMKEGTFSADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEA 69

  Fly    83 GGVEN----IVHQVPLLAAHLQSTASNWGYNSTPQRHACRGMPDNKCALPRGKVLGGTSSINYMI 143
            |.|::    .:|....|..:|.|...||.|::|.|::    :.:.....|||:|.||:|::|.|.
 Worm    70 GPVDHKWDWRIHMPAALMYNLCSDTYNWHYHTTAQKN----LGNRVFYWPRGRVWGGSSTLNAMC 130

  Fly   144 YNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSE-HAQLQGLEHSPYHNHSGPLSVEDVRHRTRLA 207
            |.||:..|::.|...|..||:|...||||.::| ::...| .:.||..::|||.|:.......|.
 Worm   131 YVRGHAYDYNRWEKEGASGWNYANCLPYFKKAETYSDATG-PNDPYRGNNGPLYVKKGDAENPLH 194

  Fly   208 HAYIRAAQEAGHP---RTDYNGESQLGVSYVQATTLKGRRHSAFRAYIEPIRSRRHNLHILTLAR 269
            .|::...:|  ||   ..|.|||.|.|:|.:..|...|.|.||.:||:.|||:|.   :::|.:.
 Worm   195 KAWLNVGKE--HPLGWTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRP---NLITSSG 254

  Fly   270 V--TRVLIDAATKSAYGVEL--------THQGRSF---KVKARKEIILSAGAFNSPQLLMLSGIG 321
            :  ||||.|  |..|.|:|.        |....|:   |:..:.::||:.||.|:||||||||:|
 Worm   255 ITCTRVLFD--TNKAIGIEFIRKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVG 317

  Fly   322 PEDNLKAIGIPLIKALP-VGKRMFDH--------------------------MCHFGPTFVTNTT 359
            |.|:|::..||::..|| ||:.:.||                          |...|..:.||.|
 Worm   318 PADHLRSHEIPIVANLPGVGQNLQDHLEIYVQQESTQPVTLYNKSSWKFPHNMIKIGLEWFTNRT 382

  Fly   360 GQTLFAAQLGAPVAKEFLLGRADTFLSSIGGVETLTFIKVPSGKSPATQPDVELIQVAGSLASDD 424
            |       |||.                 ..:||..|.:   .....|.||:: .....|...||
 Worm   383 G-------LGAS-----------------SHLETGGFAR---SDDTVTHPDIQ-FHFLPSTVHDD 419

  Fly   425 GTALAKGANFKPEIYEKMYKNLTLRQQDHFSFLIMHFKP---ASVGRLWLHNRNPLEWPRIDPKY 486
            |........::                       :|..|   .|.|.:.|..::|...|.|:|.|
 Worm   420 GRTNGTCHGYQ-----------------------VHVGPMRSQSKGYIMLQAKDPRRAPIINPNY 461

  Fly   487 FSAPSDVENLLEGIKEALRISKMPAMQAIGTRLLDK-------PVPGCENYEFASDDYWRCSIRT 544
            ....||...    .::.:|:|:    :...::..|:       |.|.|:     ||......::.
 Worm   462 MEEDSDWRE----FRKCIRVSR----ELFASKAFDEFRGKELAPGPDCQ-----SDADIDRFVKE 513

  Fly   545 LSYTLHHQVATCRMGAESDPTTVVNHQ-LKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIGEKAA 608
            .:.:.:|...||:||:|:|...|||.: :.|:|...|:|||.|::|...:.:.||...|:.|:||
 Worm   514 KAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTENLKVVDASVMPSIVSGNLNAPVIMMAERAA 578

  Fly   609 DMIR 612
            |:|:
 Worm   579 DLIK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9522NP_644677.1 PRK02106 48..612 CDD:235000 185/622 (30%)
NADB_Rossmann 52..>83 CDD:304358 18/30 (60%)
NADB_Rossmann 127..348 CDD:304358 91/264 (34%)
GMC_oxred_C 463..607 CDD:282984 41/154 (27%)
chdh-1NP_495846.1 PRK02106 41..599 CDD:235000 186/618 (30%)
NADB_Rossmann 41..>78 CDD:304358 21/36 (58%)
NADB_Rossmann 108..345 CDD:304358 91/244 (37%)
GMC_oxred_C 439..577 CDD:282984 40/150 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I1583
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 310 1.000 Inparanoid score I1553
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52181
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm14159
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.870

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