DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12539 and AT1G73050

DIOPT Version :9

Sequence 1:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_177448.1 Gene:AT1G73050 / 843636 AraportID:AT1G73050 Length:552 Species:Arabidopsis thaliana


Alignment Length:650 Identity:171/650 - (26%)
Similarity:264/650 - (40%) Gaps:175/650 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLHLLIFTTVARGDVNRLVLDQLNQVGLVNLIEQATRPNVPRDLSN---YDFIVIGAGAAGCTL 72
            |||..::..:.||..|||       ..|.:..|..||      |.::   ||:|::|.|.|||.|
plant    17 LLLLGVVHRSNARPRVNR-------PPGFMRFISNAT------DFASEDYYDYIIVGGGTAGCPL 68

  Fly    73 AARLSENPQVSVALIEAGGVENIAHLTPVVA---GYLQQTSSNWGYKSVPQK-LSCHGMNNNECA 133
            ||.||::  ..|.|:|.|||   .:..|.|.   |:|...:....:.|..|. :|..|:.|    
plant    69 AATLSQS--FRVLLLERGGV---PYNRPNVMSHDGFLTTLTDVNNFDSPAQSFISEEGVPN---- 124

  Fly   134 LPRGKILGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLEQSPYHNH 198
             .||::|||:|:||...|:|.:::.|:      |.|..:|      |.|.:...:.:|::     
plant   125 -ARGRVLGGSSAINAGFYSRADKQFFE------NSGLVWD------LSSVNQSYEWVERA----- 171

  Fly   199 SGPLSVEYVRFRSQM-------VDAFVEASVESGLPRTDYNGESQLGVSYVQANTLN--GRRHSA 254
                    :.||.|:       .||.:|..|.   |...:..|.::|.. :..:|.:  |||||:
plant   172 --------IVFRPQLRTWQTAIRDALLEVGVH---PFNGFTLEHKVGTK-IGGSTFDRTGRRHSS 224

  Fly   255 YSAYIKPVRDLRSNLQIFTFSQVTRIL------IDEATKSAYGV-------EFHYKNKAYTFKAR 306
             :..::..|.  ||:::..::.|.|:|      :..:..||.||       .||:.    ..:.|
plant   225 -ADLLRYARS--SNIRVAVYATVERVLLASSPSVSGSNVSAIGVVYRDQLGRFHHA----LIRDR 282

  Fly   307 KEVILSAGSFNSPQLLMLSGIGPEDNLRGIGIPLIKALP-VGKRMFDHMCHFGPTFVTNTTGQTT 370
            .|||||||:..|||||.||||||...|...|||:....| ||..::|                  
plant   283 GEVILSAGALGSPQLLFLSGIGPRSYLSTWGIPVALDQPHVGDFVYD------------------ 329

  Fly   371 FTSRVTPAELISFLLAGNPATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIMVTGSLASDEGTG 435
                             ||...:|.:..|..                :..||.|.|  .:::|..
plant   330 -----------------NPRNGISIVPPVPM----------------ENSLIQVVG--VTEDGAF 359

  Fly   436 LKLGAN---FKDEIYDRMYRELAQAQQDHFTLLIMQ-FHPKSVGRLWLKDRNPLGWPKIDPKYFV 496
            |:..:|   |...::....|..|.......|.::.: ..|.|:|.|.|...:....|.:...||.
plant   360 LEAASNVIPFASPLHSVFIRAPASPLYVPVTTIMEKILGPVSIGLLRLASTDVRINPVVRFNYFS 424

  Fly   497 AEEDVEYLLDGIKASLRIIEMPAMQR--------------IGARLLKRTVPGCEGHQFASDDYWR 547
            ..:|:|..::|.:....|:...|||.              :||.|     |..:.:.....|:.|
plant   425 DPQDLERCVNGTRKIGEILRSRAMQDFMIREWFGNRRFRFVGAPL-----PVDQSNDLVMADFCR 484

  Fly   548 CSIRTLSYTLHHQVATCRMGAESDPTTVVNHQLKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIG 612
               ||:| |:.|......:|      .||:..|||.||..||:||.|.....|..:..|...|:|
plant   485 ---RTVS-TIWHYHGGAVVG------KVVDSDLKVIGVNSLRLVDGSTFNISPGTNPQATLMMLG 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12539NP_572976.1 PRK02106 58..620 CDD:235000 157/599 (26%)
NADB_Rossmann 59..>90 CDD:304358 15/30 (50%)
NADB_Rossmann 128..355 CDD:304358 73/249 (29%)
GMC_oxred_C 471..615 CDD:282984 42/155 (27%)
AT1G73050NP_177448.1 PLN02785 30..551 CDD:215420 165/636 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

Return to query results.
Submit another query.