DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12539 and AT1G03990

DIOPT Version :10

Sequence 1:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_171895.2 Gene:AT1G03990 / 839342 AraportID:AT1G03990 Length:758 Species:Arabidopsis thaliana


Alignment Length:707 Identity:132/707 - (18%)
Similarity:238/707 - (33%) Gaps:209/707 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISQLFLLLHLLIFTTVARGDVNRLVLDQLN---QVGLVNLIEQATRP------------------ 49
            |..:||..:   ||.......|. |.|.:|   ::|....:||..||                  
plant   164 IKAIFLFYY---FTWTNENSENP-VWDAINYSVEIGENEDMEQKERPLDEGIIETAKEDEMTIKQ 224

  Fly    50 ---------NVPRDLSNY----DFIVIGAGAAGCTLAARLSENPQVSVALIEAGGVENIAHLTPV 101
                     ...|:...|    |.:|:|:|..|...||.|::: .:.|.:||.|.     :..|.
plant   225 RMINKGLKVTEDRERDTYKIECDAVVVGSGCGGGVAAAILAKS-GLRVVVIEKGN-----YFAPR 283

  Fly   102 VAGYLQQTSSNWGYKSVPQKLSCHGMNNNECALPRGKILGGTSSINYMIYNRGNRRDFDAWAAA- 165
            ....|:..|....::|....::    ::.......|..:||.|.:|              |||: 
plant   284 DYSALEGPSMFELFESNSLMMT----HDGRFRFMAGSTVGGGSVVN--------------WAASL 330

  Fly   166 GNPG-----WSYDEVLPYFLRSEHAQLQGLEQSPYHNHSGPLSVEYVRFRSQMVDAFVEASVESG 225
            ..|.     ||....:..:...::....|:                |..|..:.:..:....::.
plant   331 KTPDAIIEEWSVHRGISIYSSEKYKAAMGI----------------VCKRLGVTEKIIREGFQNQ 379

  Fly   226 LPRTDYNGESQLG--VSYVQANTL-------------NGRRHSAYSAYIKPVRDLRSNLQIFTFS 275
            :.|   .|..:||  |:.|..|:.             .|.:....|.::  |..:.:|..|.|..
plant   380 ILR---KGCEKLGLDVTIVPRNSTEKHYCGSCSYGCPTGEKRGTDSTWL--VDAVNNNAVILTQC 439

  Fly   276 QVTRILIDE----------ATKSAYGVE---FHYKNKAYTFKARKEVILSAGSFNSPQLLMLSGI 327
            :..::::.:          ..|...||.   .|...|.....| |..|::.||..:|.||..||:
plant   440 KAEKLILADNDANKREESGRRKRCLGVAASLSHQTRKKLQINA-KVTIVACGSLKTPGLLASSGL 503

  Fly   328 GPEDNLRGIGI-PLIKA---LPVGKRMFDHMCHFGPTFVT------------NTTGQTTFTSRVT 376
            ...:..||:.| |::.|   .|......:...|.|....:            |.|.:|......|
plant   504 KNSNISRGLHIHPIMMAWGYFPEKNSELEGAAHEGEIVTSLHYVHPMDSTTPNITLETPAIGPGT 568

  Fly   377 PAELISFLLAGNPATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIMVTGSLASDEGTGLKLGAN 441
            .|.|..::...:...||:.        :.:|..               ..::..|||.|...|..
plant   569 FAALTPWVSGSDMKERMAK--------YARTAH---------------IFAMVRDEGVGEVKGDI 610

  Fly   442 FKDEIYDRMYRELAQAQQDHFTLLIMQFHPKSVGRLWLKDRNPLGWPKIDPKYF----VAEEDVE 502
            .|       || |.:|.:::.|:.:.|    ::..|.......:|..:.|.:..    :.::|:|
plant   611 VK-------YR-LTKADEENLTIGLKQ----ALRILVAAGAAEVGTYRSDGQRMKCDGIKQKDLE 663

  Fly   503 YLLDGIKASLRIIEMPAMQRIGARLLKRTVPGCEGHQFASDDYWRCSIRTLSYTLHHQVATCRMG 567
            ..||.:.|...::.|                         ..:|     |.|:|. ||:..||||
plant   664 AFLDTVNAPPGVVSM-------------------------SKHW-----TQSFTA-HQIGCCRMG 697

  Fly   568 AESDPTTVVNHQLKVHGVRKLRVVDTSIIP----FPPTAHTNAAAFMIGEKAADMIR 620
            | ::....::.:.:......|.|.|.|::|    ..|.....:.|:.|..:.|::::
plant   698 A-TEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISNRIAELMK 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12539NP_572976.1 BetA 58..622 CDD:441878 117/625 (19%)
AT1G03990NP_171895.2 GMC_oxred_N 293..517 CDD:366272 46/263 (17%)
GMC_oxred_C 611..744 CDD:398739 34/176 (19%)

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