DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12539 and AT1G12570

DIOPT Version :9

Sequence 1:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_172718.2 Gene:AT1G12570 / 837814 AraportID:AT1G12570 Length:572 Species:Arabidopsis thaliana


Alignment Length:684 Identity:173/684 - (25%)
Similarity:262/684 - (38%) Gaps:214/684 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QLFLLLHLLIFTTVARGDVNRLVLDQLNQVGLVNLIEQATRPNVPRD------LSNYDFIVIGAG 66
            :||:.|.|.:.:.:...|                   :|...:..||      .|.||:|:||.|
plant     9 RLFVALSLFLHSPICSSD-------------------KAPNYSFMRDATGSPTTSYYDYIIIGGG 54

  Fly    67 AAGCTLAARLSENPQVSVALIEAG----GVENIAHLTPVVAGYLQQTSSNWGYKSVPQKLSCHGM 127
            .|||.|||.||:|  .||.|:|.|    ...||..|:...|.....:.|:...:.|.:    .|:
plant    55 TAGCPLAATLSQN--ASVLLLERGDSPYNNPNITRLSAFGAALSDLSESSPSQRFVSE----DGV 113

  Fly   128 NNNECALPRGKILGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLE- 191
            .|     .|.::|||.|::|...|.|...:      ...|.||  |..|      .:...|.:| 
plant   114 IN-----ARARVLGGGSALNAGFYTRAGTK------YVRNMGW--DGAL------ANESYQWVEA 159

  Fly   192 ----QSPYHNHSGPLSVEYVRFRSQMVDAFVEASV--ESGLPRTDYNGESQLGVSYVQANTLNGR 250
                |.|..           |:::.:.|..:||.:  .:|......||....|..:.:    ||.
plant   160 KVAFQPPMG-----------RWQTAVRDGLLEAGIVPNNGFTYDHINGTKFGGTIFDR----NGN 209

  Fly   251 RHSAYS--AYIKPVRDLRSNLQIFTFSQVTRILIDE--ATKS-AYGVEFHYK----NKAYTFK-A 305
            ||:|..  .|..|     ..:.:...:.|.|||...  .||. |.||.:..:    ::||..: |
plant   210 RHTAADLLEYADP-----KGITVLLHATVHRILFRTRGTTKPIANGVVYRDRTGQAHRAYLKEGA 269

  Fly   306 RKEVILSAGSFNSPQLLMLSGIGPEDNLRGIGIPLIKALP-VGKRMFDHMCHFGPTFVTNTTGQT 369
            ..|:|||||:..|||||||||:||...|:...|.::...| ||:.|:|                 
plant   270 LSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQPHVGQGMYD----------------- 317

  Fly   370 TFTSRVTPAELISFLLAGNPATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIMVTGSLASDEGT 434
                              ||   |:::       |:.   |.:|.:...||::.:||     |||
plant   318 ------------------NP---MNAV-------FVP---SPVPVEVSLIEVVGITG-----EGT 346

  Fly   435 GLKL--GANF-------------KDEIYDRMY------------RELAQAQ--QDHFTLLIMQFH 470
            .::.  |.||             :|  |..|:            .:|:.||  |..| ||.....
plant   347 YVEAAGGENFGGGGGGSSGSSSTRD--YYAMFSPRATLLESNSMTKLSSAQPFQGGF-LLEKVMG 408

  Fly   471 PKSVGRLWLKDRNPLGWPKIDPKYFVAEEDVEYLLDGIKASLRIIEMPAMQR-----IGARLL-- 528
            |.|.|.|.||.|||...|.:...||...:|::..:.||:...|:::..|..|     :....|  
plant   409 PLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSRYKYADVSFEYLLN 473

  Fly   529 -----------KRTVPGC----EGHQFASDDYWRCSIRTLSYTLHHQVATCRMGAESDPTTVVNH 578
                       .|:.||.    ...:|..        .|:: |:.|....|.:|      .||:.
plant   474 LTASTPVNLRPPRSGPGASLPPSAEEFCQ--------HTVT-TIWHYHGGCVVG------RVVDG 523

  Fly   579 QLKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIG 612
            ..||.|:.:|||:|.|.:.:.|..:..|...|:|
plant   524 DYKVIGIDRLRVIDMSTVGYCPGTNPQATVMMLG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12539NP_572976.1 PRK02106 58..620 CDD:235000 164/628 (26%)
NADB_Rossmann 59..>90 CDD:304358 18/30 (60%)
NADB_Rossmann 128..355 CDD:304358 69/244 (28%)
GMC_oxred_C 471..615 CDD:282984 42/164 (26%)
AT1G12570NP_172718.2 PLN02785 10..572 CDD:215420 173/683 (25%)
NADB_Rossmann 46..301 CDD:304358 90/299 (30%)
NADB_Rossmann 47..>100 CDD:304358 23/54 (43%)
GMC_oxred_C 409..557 CDD:282984 41/162 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

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