DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12539 and AT3G56060

DIOPT Version :10

Sequence 1:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_567032.1 Gene:AT3G56060 / 824772 AraportID:AT3G56060 Length:577 Species:Arabidopsis thaliana


Alignment Length:661 Identity:167/661 - (25%)
Similarity:267/661 - (40%) Gaps:173/661 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FLLLHLLIFTTVARGDVNRLVLDQLNQVGLVNLIEQATRPNVPRDLSNYDFIVIGAGAAGCTLAA 74
            |:|:.:.||......|          :.|....::.||.  .|: ||::|:|:||.|.|||.|||
plant    11 FILVAVFIFHDSCYSD----------EAGNYRFMKDATL--APK-LSHFDYIIIGGGTAGCALAA 62

  Fly    75 RLSENPQVSVALIEAGG----------VENIAHLTPVVAGYLQQTSSNWGYKSVPQKLSCHGMNN 129
            .||:|  .:|.::|.||          :.|.|:.      .|..|.::|....:.:    .|:.|
plant    63 TLSQN--ATVLVLERGGSPYDDPAATDIGNFANT------LLNITPNSWSQLFISE----DGVFN 115

  Fly   130 NECALPRGKILGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLEQSP 194
            :     |.::|||.:.||...|:|. ..||.|.|     ||..|||...:   |..:.:.:.:.|
plant   116 S-----RARVLGGGTVINAGFYSRA-EEDFVAEA-----GWERDEVEAAY---EWVEKKVVFEPP 166

  Fly   195 YHNHSGPLSVEYVRFRSQMVDAFVEASVESGLPRTDYNG---ESQLGVSYVQANTL---NGRRHS 253
            .:           :::|...|..:||.|      |.|||   |..:|..:  ..|:   :|.||:
plant   167 VN-----------KWQSAFRDGLLEAGV------TPYNGFTYEHIVGTKF--GGTIFDRDGHRHT 212

  Fly   254 AYS--AYIKPVRDLRSNLQIFTFSQVTRILI---DEATKSAYGVEFHYKNKAYTFKAR------- 306
            |.:  .|..|     :.:.::..:.|.:||.   ......||||.|...| ..::||.       
plant   213 AANLLEYANP-----NMIVVYLHASVHKILFTIKGNQRPKAYGVIFLDAN-GVSYKAELATQDST 271

  Fly   307 -KEVILSAGSFNSPQLLMLSGIGPEDNLRGIGI-PLIKALP-VGKRMFDHMCHFGPTFV------ 362
             .|||||||:..|||||||||:||..:|....: |:|...| ||:.|.|:  ...|.|:      
plant   272 MSEVILSAGAIASPQLLMLSGVGPAAHLAAYRVNPVIVDQPMVGQGMGDN--PMNPVFIPSPEPV 334

  Fly   363 ----TNTTGQTTFTSRVTPAELISFLLAGNPATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIM 423
                ....|.|.|.|.:.....:|..::   .||....|.:..|...|....::...:..::|.:
plant   335 EVSLVQAVGITKFGSYIEGGSALSLSIS---LTRSFFDGVLNLLKKTKLPTQSISKFFKSLDLTL 396

  Fly   424 -VTGSLASDEGTGLKLGANFKDEIYDRMYRELAQAQQDHFTLLIMQFH-PKSVGRLWLKDRNPLG 486
             ||          .|.|                        ::|.:.: |.|.|.|.|::.||..
plant   397 NVT----------TKAG------------------------VIIQKVNGPLSRGHLELRNTNPDD 427

  Fly   487 WPKIDPKYFVAEEDVEYLLDGIKASLRIIEMPAMQRIGARLLKRTVPGCEG-------------- 537
            .|.:...||...||:...::|:...:::|:..     |....|..:....|              
plant   428 NPSVTFNYFKDPEDLNKCVEGLSTIIKVIDSK-----GYSKYKYPLASARGLLNLILALPTNLRP 487

  Fly   538 -HQFASDDYWRCSIRTLSYTLHHQVATCRMGAESDPTTVVNHQLKVHGVRKLRVVDTSIIPFPPT 601
             |..::.|..:..|.|: .|::|....|::|      .||::..||.||..||::|.|.....|.
plant   488 RHITSTFDLEQYCIDTV-MTIYHYHGGCQVG------KVVDNNYKVLGVDALRIIDGSTFLKSPG 545

  Fly   602 AHTNAAAFMIG 612
            .:..|...|:|
plant   546 TNPQATIMMLG 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12539NP_572976.1 BetA 58..622 CDD:441878 156/613 (25%)
AT3G56060NP_567032.1 PLN02785 5..568 CDD:215420 167/661 (25%)

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