DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12539 and CG9522

DIOPT Version :9

Sequence 1:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_644677.1 Gene:CG9522 / 32413 FlyBaseID:FBgn0030587 Length:616 Species:Drosophila melanogaster


Alignment Length:624 Identity:441/624 - (70%)
Similarity:505/624 - (80%) Gaps:10/624 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSTQISQ-LFLLLHLLIFTTVARGDVNRLVLDQLNQVGLVNLIEQATRPNVPRDLSNYDFIVIG 64
            |:...::| |||||..||.:.      ....||:|.::||.|::......:||:  .|||||::|
  Fly     1 MEKLLLTQLLFLLLIPLIHSQ------RSSQLDELRRLGLGNVVNVPFFSDVPQ--RNYDFIIVG 57

  Fly    65 AGAAGCTLAARLSENPQVSVALIEAGGVENIAHLTPVVAGYLQQTSSNWGYKSVPQKLSCHGMNN 129
            .|||||||||||||||..||.||||||||||.|..|::|.:||.|:|||||.|.||:.:|.||.:
  Fly    58 GGAAGCTLAARLSENPNWSVFLIEAGGVENIVHQVPLLAAHLQSTASNWGYNSTPQRHACRGMPD 122

  Fly   130 NECALPRGKILGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLEQSP 194
            |:|||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||.||
  Fly   123 NKCALPRGKVLGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSEHAQLQGLEHSP 187

  Fly   195 YHNHSGPLSVEYVRFRSQMVDAFVEASVESGLPRTDYNGESQLGVSYVQANTLNGRRHSAYSAYI 259
            |||||||||||.||.|:::..|::.|:.|:|.||||||||||||||||||.||.||||||:.|||
  Fly   188 YHNHSGPLSVEDVRHRTRLAHAYIRAAQEAGHPRTDYNGESQLGVSYVQATTLKGRRHSAFRAYI 252

  Fly   260 KPVRDLRSNLQIFTFSQVTRILIDEATKSAYGVEFHYKNKAYTFKARKEVILSAGSFNSPQLLML 324
            :|:|..|.||.|.|.::|||:|||.|||||||||..::.:::..|||||:|||||:|||||||||
  Fly   253 EPIRSRRHNLHILTLARVTRVLIDAATKSAYGVELTHQGRSFKVKARKEIILSAGAFNSPQLLML 317

  Fly   325 SGIGPEDNLRGIGIPLIKALPVGKRMFDHMCHFGPTFVTNTTGQTTFTSRVTPAELISFLLAGNP 389
            |||||||||:.||||||||||||||||||||||||||||||||||.|.:::.......||| |..
  Fly   318 SGIGPEDNLKAIGIPLIKALPVGKRMFDHMCHFGPTFVTNTTGQTLFAAQLGAPVAKEFLL-GRA 381

  Fly   390 ATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIMVTGSLASDEGTGLKLGANFKDEIYDRMYREL 454
            .|.:|||||||.|.|:|......|...||:|||.|.||||||:||.|..|||||.|||::||:.|
  Fly   382 DTFLSSIGGVETLTFIKVPSGKSPATQPDVELIQVAGSLASDDGTALAKGANFKPEIYEKMYKNL 446

  Fly   455 AQAQQDHFTLLIMQFHPKSVGRLWLKDRNPLGWPKIDPKYFVAEEDVEYLLDGIKASLRIIEMPA 519
            ...|||||:.|||.|.|.|||||||.:||||.||:||||||.|..|||.||:|||.:|||.:|||
  Fly   447 TLRQQDHFSFLIMHFKPASVGRLWLHNRNPLEWPRIDPKYFSAPSDVENLLEGIKEALRISKMPA 511

  Fly   520 MQRIGARLLKRTVPGCEGHQFASDDYWRCSIRTLSYTLHHQVATCRMGAESDPTTVVNHQLKVHG 584
            ||.||.|||.:.|||||.::|||||||||||||||||||||||||||||||||||||||||||||
  Fly   512 MQAIGTRLLDKPVPGCENYEFASDDYWRCSIRTLSYTLHHQVATCRMGAESDPTTVVNHQLKVHG 576

  Fly   585 VRKLRVVDTSIIPFPPTAHTNAAAFMIGEKAADMIRTDW 623
            ||||||||||||||||||||||||||||||||||||::|
  Fly   577 VRKLRVVDTSIIPFPPTAHTNAAAFMIGEKAADMIRSEW 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12539NP_572976.1 PRK02106 58..620 CDD:235000 420/561 (75%)
NADB_Rossmann 59..>90 CDD:304358 24/30 (80%)
NADB_Rossmann 128..355 CDD:304358 177/226 (78%)
GMC_oxred_C 471..615 CDD:282984 121/143 (85%)
CG9522NP_644677.1 PRK02106 48..612 CDD:235000 421/566 (74%)
NADB_Rossmann 52..>83 CDD:304358 24/30 (80%)
NADB_Rossmann 127..348 CDD:304358 174/220 (79%)
GMC_oxred_C 463..607 CDD:282984 121/143 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454134
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 1 1.000 - - H81442
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D14893at7147
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 1 1.100 - - P PTHR11552
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
1110.890

Return to query results.
Submit another query.