DRSC/TRiP Functional Genomics Resources

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Protein Alignment sp1 and l(3)neo38

DIOPT Version :9

Sequence 1:NP_997827.2 Gene:sp1 / 324109 ZFINID:ZDB-GENE-030131-2829 Length:594 Species:Danio rerio
Sequence 2:NP_001262485.1 Gene:l(3)neo38 / 41423 FlyBaseID:FBgn0265276 Length:455 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sp1NP_997827.2 C2H2 Zn finger 452..474 CDD:275368
COG5048 <465..547 CDD:227381
zf-H2C2_2 466..493 CDD:290200
C2H2 Zn finger 482..504 CDD:275368
zf-H2C2_2 496..519 CDD:290200
zf-C2H2 510..532 CDD:278523
C2H2 Zn finger 512..532 CDD:275368
l(3)neo38NP_001262485.1 C2H2 Zn finger 305..325 CDD:275368
zf-C2H2_8 306..391 CDD:292531
C2H2 Zn finger 333..353 CDD:275368
zf-H2C2_2 345..370 CDD:290200
C2H2 Zn finger 361..381 CDD:275368
zf-H2C2_2 374..398 CDD:290200
C2H2 Zn finger 389..409 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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